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Could a Neuroscientist Understand a Microprocessor?

Eric Jonas, View ORCID ProfileKonrad Paul Kording
doi: https://doi.org/10.1101/055624
Eric Jonas
1Department of Electrical Engineering and Computer Science, University of California, Berkeley
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Konrad Paul Kording
2Department of Physical Medicine and Rehabilitation, Northwestern University and Rehabilitation Institute of Chicago, 345 E Superior St., Chicago, Illinois, 60611
3Department of Physiology, Northwestern University, 303 E Chicago Ave, Chicago, Illinois 60611
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Abstract

There is a popular belief in neuroscience that we are primarily data limited, and that producing large, multimodal, and complex datasets will, with the help of advanced data analysis algorithms, lead to fundamental insights into the way the brain processes information. These datasets do not yet exist, and if they did we would have no way of evaluating whether or not the algorithmically-generated insights were sufficient or even correct. To address this, here we take a classical microprocessor as a model organism, and use our ability to perform arbitrary experiments on it to see if popular data analysis methods from neuroscience can elucidate the way it processes information. Microprocessors are among those artificial information processing systems that are both complex and that we understand at all levels, from the overall logical flow, via logical gates, to the dynamics of transistors. We show that the approaches reveal interesting structure in the data but do not meaningfully describe the hierarchy of information processing in the microprocessor. This suggests current analytic approaches in neuroscience may fall short of producing meaningful understanding of neural systems, regardless of the amount of data. Additionally, we argue for scientists using complex non-linear dynamical systems with known ground truth, such as the microprocessor as a validation platform for time-series and structure discovery methods.

Author Summary Neuroscience is held back by the fact that it is hard to evaluate if a conclusion is correct; the complexity of the systems under study and their experimental inaccessability make the assessment of algorithmic and data analytic technqiues challenging at best. We thus argue for testing approaches using known artifacts, where the correct interpretation is known. Here we present a microprocessor platform as one such test case. We find that many approaches in neuroscience, when used na•vely, fall short of producing a meaningful understanding.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted November 14, 2016.
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Could a Neuroscientist Understand a Microprocessor?
Eric Jonas, Konrad Paul Kording
bioRxiv 055624; doi: https://doi.org/10.1101/055624
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Could a Neuroscientist Understand a Microprocessor?
Eric Jonas, Konrad Paul Kording
bioRxiv 055624; doi: https://doi.org/10.1101/055624

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