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Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments

Didi He, Sam Hughes, Sally Vanden-Hehir, Atanas Georgiev, Kirsten Altenbach, Emma Tarrant, C. Logan Mackay, Kevin J. Waldron, David J. Clarke, View ORCID ProfileJon Marles-Wright
doi: https://doi.org/10.1101/063495
Didi He
1Institute of Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF
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Sam Hughes
2The School of Chemistry, The University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh, Scotland. EH9 3FJ
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Sally Vanden-Hehir
2The School of Chemistry, The University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh, Scotland. EH9 3FJ
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Atanas Georgiev
1Institute of Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF
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Kirsten Altenbach
1Institute of Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF
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Emma Tarrant
3Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, NE2 4HH
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C. Logan Mackay
2The School of Chemistry, The University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh, Scotland. EH9 3FJ
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Kevin J. Waldron
3Institute for Cell and Molecular Biosciences, Newcastle University, Newcastle upon Tyne, NE2 4HH
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David J. Clarke
2The School of Chemistry, The University of Edinburgh, Joseph Black Building, David Brewster Road, Edinburgh, Scotland. EH9 3FJ
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  • For correspondence: Jon.marles-wright1@ncl.ac.uk Dave.clarke@ed.ac.uk
Jon Marles-Wright
1Institute of Quantitative Biology, Biochemistry and Biotechnology, School of Biological Sciences, The University of Edinburgh, Max Born Crescent, Edinburgh, EH9 3BF
4School of Biology, Newcastle University. Newcastle upon Tyne, NE1 7RU
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  • ORCID record for Jon Marles-Wright
  • For correspondence: Jon.marles-wright1@ncl.ac.uk Dave.clarke@ed.ac.uk
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Abstract

Ferritins are ubiquitous proteins that oxidise and store iron within a protein shell to protect cells from oxidative damage. We have characterized the structure and function of a new member of the ferritin superfamily that is sequestered within an encapsulin capsid. We show that this encapsulated ferritin (EncFtn) has two main alpha helices, which assemble in a metal dependent manner to form a ferroxidase centre at a dimer interface. EncFtn adopts an open decameric structure that is topologically distinct from other ferritins. While EncFtn acts as a ferroxidase, it cannot mineralize iron. Conversely, the encapsulin shell associates with iron, but is not enzymatically active, and we demonstrate that EncFtn must be housed within the encapsulin for iron storage. This encapsulin nanocompartment is widely distributed in bacteria and archaea and represents a distinct class of iron storage system where the oxidation and mineralization of iron are distributed between two proteins.

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Posted July 13, 2016.
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Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments
Didi He, Sam Hughes, Sally Vanden-Hehir, Atanas Georgiev, Kirsten Altenbach, Emma Tarrant, C. Logan Mackay, Kevin J. Waldron, David J. Clarke, Jon Marles-Wright
bioRxiv 063495; doi: https://doi.org/10.1101/063495
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Structural characterization of encapsulated ferritin provides insight into iron storage in bacterial nanocompartments
Didi He, Sam Hughes, Sally Vanden-Hehir, Atanas Georgiev, Kirsten Altenbach, Emma Tarrant, C. Logan Mackay, Kevin J. Waldron, David J. Clarke, Jon Marles-Wright
bioRxiv 063495; doi: https://doi.org/10.1101/063495

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