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290 Metagenome-assembled Genomes from the Mediterranean Sea: a resource for marine microbiology

View ORCID ProfileBenjamin J. Tully, Rohan Sachdeva, View ORCID ProfileElaina D. Graham, John F. Heidelberg
doi: https://doi.org/10.1101/069484
Benjamin J. Tully
Center for Dark Energy Biosphere Investigations, University of Southern California, Los Angeles, CA 90089
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  • For correspondence: tully.bj@gmail.com
Rohan Sachdeva
Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089
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Elaina D. Graham
Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089
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John F. Heidelberg
Center for Dark Energy Biosphere Investigations, University of Southern California, Los Angeles, CA 90089Department of Biological Sciences, University of Southern California, Los Angeles, CA 90089
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Abstract

The Tara Oceans Expedition has provided large, publicly-accessible microbial metagenomic datasets from a circumnavigation of the globe. Utilizing several size fractions from the samples originating in the Mediterranean Sea, we have used current assembly and binning techniques to reconstruct 290 putative high-quality metagenome-assembled bacterial and archaeal genomes, with an estimated completion of ≥50%, and an additional 2,786 bins, with estimated completion of 0-50%. We have submitted our results, including initial taxonomic and phylogenetic assignments, for the putative high-quality genomes to open-access repositories for the scientific community to use in ongoing research.

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Posted May 04, 2017.
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290 Metagenome-assembled Genomes from the Mediterranean Sea: a resource for marine microbiology
Benjamin J. Tully, Rohan Sachdeva, Elaina D. Graham, John F. Heidelberg
bioRxiv 069484; doi: https://doi.org/10.1101/069484
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290 Metagenome-assembled Genomes from the Mediterranean Sea: a resource for marine microbiology
Benjamin J. Tully, Rohan Sachdeva, Elaina D. Graham, John F. Heidelberg
bioRxiv 069484; doi: https://doi.org/10.1101/069484

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