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HOMINID: A framework for identifying associations between host genetic variation and microbiome composition

Joshua Lynch, Karen Tang, Sambhawa Priya, Joanna Sands, Margaret Sands, Evan Tang, Sayan Mukherjee, Dan Knights, Ran Blekhman
doi: https://doi.org/10.1101/081323
Joshua Lynch
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Karen Tang
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Sambhawa Priya
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Joanna Sands
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Margaret Sands
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Evan Tang
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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Sayan Mukherjee
3Departments of Statistical Science, Mathematics, and Computer Science, Duke University, Durham, NC, USA
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Dan Knights
4Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA
5Biotechnology Institute, University of Minnesota, Minneapolis, MN, USA
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  • For correspondence: blekhman@umn.edu dknights@umn.edu
Ran Blekhman
1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
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  • For correspondence: blekhman@umn.edu dknights@umn.edu
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Article Information

doi 
https://doi.org/10.1101/081323
History 
  • July 21, 2017.

Article Versions

  • Version 1 (October 17, 2016 - 13:25).
  • You are viewing Version 2, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Joshua Lynch1,2,#,
  2. Karen Tang1,2,
  3. Sambhawa Priya1,2,
  4. Joanna Sands1,2,
  5. Margaret Sands1,2,
  6. Evan Tang1,2,
  7. Sayan Mukherjee3,
  8. Dan Knights4,5,* and
  9. Ran Blekhman1,2,*
  1. 1Department of Genetics, Cell Biology, and Development, University of Minnesota, Minneapolis, MN, USA
  2. 2Department of Ecology, Evolution, and Behavior, University of Minnesota, Minneapolis, MN, USA
  3. 3Departments of Statistical Science, Mathematics, and Computer Science, Duke University, Durham, NC, USA
  4. 4Department of Computer Science and Engineering, University of Minnesota, Minneapolis, MN, USA
  5. 5Biotechnology Institute, University of Minnesota, Minneapolis, MN, USA
  1. ↵*To whom correspondence should be addressed: blekhman{at}umn.edu (RB), dknights{at}umn.edu (DK)
  1. ↵# Current affiliation: Department of Agricultural and Biosystems Engineering, University of Arizona, Tucson, AZ, USA

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Posted July 21, 2017.
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HOMINID: A framework for identifying associations between host genetic variation and microbiome composition
Joshua Lynch, Karen Tang, Sambhawa Priya, Joanna Sands, Margaret Sands, Evan Tang, Sayan Mukherjee, Dan Knights, Ran Blekhman
bioRxiv 081323; doi: https://doi.org/10.1101/081323
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HOMINID: A framework for identifying associations between host genetic variation and microbiome composition
Joshua Lynch, Karen Tang, Sambhawa Priya, Joanna Sands, Margaret Sands, Evan Tang, Sayan Mukherjee, Dan Knights, Ran Blekhman
bioRxiv 081323; doi: https://doi.org/10.1101/081323

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