New Results
Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data
Joseph N. Paulson, Cho-Yi Chen, Camila M. Lopes-Ramos, Marieke L Kuijjer, John Platig, Abhijeet R. Sonawane, Maud Fagny, Kimberly Glass, John Quackenbush
doi: https://doi.org/10.1101/081802
Joseph N. Paulson
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
Cho-Yi Chen
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
Camila M. Lopes-Ramos
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
Marieke L Kuijjer
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
John Platig
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
Abhijeet R. Sonawane
3Channing Division of Network Medicine, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 02215, USA
Maud Fagny
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
Kimberly Glass
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
3Channing Division of Network Medicine, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 02215, USA
John Quackenbush
1Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
2Department of Biostatistics, Harvard School of Public Health, Boston, MA 02215, USA
3Channing Division of Network Medicine, Brigham and Women’s Hospital and Harvard Medical School, Boston, MA 02215, USA
4Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA
Posted October 20, 2016.
Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data
Joseph N. Paulson, Cho-Yi Chen, Camila M. Lopes-Ramos, Marieke L Kuijjer, John Platig, Abhijeet R. Sonawane, Maud Fagny, Kimberly Glass, John Quackenbush
bioRxiv 081802; doi: https://doi.org/10.1101/081802
Subject Area
Subject Areas
- Biochemistry (11736)
- Bioengineering (8749)
- Bioinformatics (29186)
- Biophysics (14964)
- Cancer Biology (12086)
- Cell Biology (17403)
- Clinical Trials (138)
- Developmental Biology (9418)
- Ecology (14176)
- Epidemiology (2067)
- Evolutionary Biology (18299)
- Genetics (12235)
- Genomics (16795)
- Immunology (11863)
- Microbiology (28066)
- Molecular Biology (11582)
- Neuroscience (60936)
- Paleontology (451)
- Pathology (1870)
- Pharmacology and Toxicology (3238)
- Physiology (4956)
- Plant Biology (10423)
- Synthetic Biology (2883)
- Systems Biology (7338)
- Zoology (1650)