SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Hirotaka Matsumoto; Hisanori Kiryu; Chikara Furusawa; Minoru S.H. Ko; Shigeru B.H. Ko; Norio Gouda; Tetsutaro Hayash; Itoshi Nikaido

doi:10.1101/088856

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SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S.H. Ko, Shigeru B.H. Ko, Norio Gouda, Tetsutaro Hayash, Itoshi Nikaido

doi: https://doi.org/10.1101/088856

Hirotaka Matsumoto

aBioinformatics Research Unit, Advanced Center for Computing and Communication, RIKEN, Saitama, Japan

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For correspondence: hirotaka.matsumoto@riken.jp

Hisanori Kiryu

bDepartment of Computational Biology and Medical Sciences, Faculty of Frontier Sciences, The University of Tokyo, Chiba, Japan

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Chikara Furusawa

cQuantitative Biology Center (QBiC), RIKEN, Osaka, Japan

dUniversal Biology Institute, The University of Tokyo, Tokyo, Japan

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Minoru S.H. Ko

eDepartment of Systems Medicine, Keio University School of Medicine, Tokyo, Japan

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Shigeru B.H. Ko

eDepartment of Systems Medicine, Keio University School of Medicine, Tokyo, Japan

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Norio Gouda

eDepartment of Systems Medicine, Keio University School of Medicine, Tokyo, Japan

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Tetsutaro Hayash

aBioinformatics Research Unit, Advanced Center for Computing and Communication, RIKEN, Saitama, Japan

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Itoshi Nikaido

aBioinformatics Research Unit, Advanced Center for Computing and Communication, RIKEN, Saitama, Japan

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Posted November 21, 2016.

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SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S.H. Ko, Shigeru B.H. Ko, Norio Gouda, Tetsutaro Hayash, Itoshi Nikaido

bioRxiv 088856; doi: https://doi.org/10.1101/088856

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SCODE: An efficient regulatory network inference algorithm from single-cell RNA-Seq during differentiation

Hirotaka Matsumoto, Hisanori Kiryu, Chikara Furusawa, Minoru S.H. Ko, Shigeru B.H. Ko, Norio Gouda, Tetsutaro Hayash, Itoshi Nikaido

bioRxiv 088856; doi: https://doi.org/10.1101/088856

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