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Single-cell transcriptomics of malaria parasites

Adam J. Reid, Arthur M. Talman, Hayley M. Bennett, Ana R. Gomes, Mandy J. Sanders, Christopher J. R. Illingworth, Oliver Billker, Matthew Berriman, View ORCID ProfileMara K. N. Lawniczak
doi: https://doi.org/10.1101/105015
Adam J. Reid
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Arthur M. Talman
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Hayley M. Bennett
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Ana R. Gomes
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Mandy J. Sanders
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Christopher J. R. Illingworth
2Department of Genetics, University of Cambridge, Cambridge UK
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Oliver Billker
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Matthew Berriman
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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Mara K. N. Lawniczak
1Malaria Programme, Wellcome Trust Sanger Institute, Hinxton, Cambridge UK
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  • ORCID record for Mara K. N. Lawniczak
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Abstract

Single-cell RNA-sequencing is revolutionising our understanding of seemingly homogeneous cell populations, but has not yet been applied to single cell organisms. Here, we established a method to successfully investigate transcriptional variation across individual malaria parasites. We discover an unexpected, discontinuous program of transcription during asexual growth previously masked by bulk analyses, and uncover novel variation among sexual stage parasites in their expression of gene families important in host-parasite interactions.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted February 10, 2017.
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Single-cell transcriptomics of malaria parasites
Adam J. Reid, Arthur M. Talman, Hayley M. Bennett, Ana R. Gomes, Mandy J. Sanders, Christopher J. R. Illingworth, Oliver Billker, Matthew Berriman, Mara K. N. Lawniczak
bioRxiv 105015; doi: https://doi.org/10.1101/105015
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Single-cell transcriptomics of malaria parasites
Adam J. Reid, Arthur M. Talman, Hayley M. Bennett, Ana R. Gomes, Mandy J. Sanders, Christopher J. R. Illingworth, Oliver Billker, Matthew Berriman, Mara K. N. Lawniczak
bioRxiv 105015; doi: https://doi.org/10.1101/105015

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