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HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps

View ORCID ProfilePeter Kerpedjiev, View ORCID ProfileNezar Abdennur, View ORCID ProfileFritz Lekschas, View ORCID ProfileChuck McCallum, Kasper Dinkla, Hendrik Strobelt, View ORCID ProfileJacob M Luber, Scott Ouellette, Alaleh Azhir, Nikhil Kumar, Jeewon Hwang, Soohyun Lee, View ORCID ProfileBurak H Alver, View ORCID ProfileHanspeter Pfister, View ORCID ProfileLeonid A Mirny, View ORCID ProfilePeter J Park, View ORCID ProfileNils Gehlenborg
doi: https://doi.org/10.1101/121889
Peter Kerpedjiev
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Nezar Abdennur
2Computational and Systems Biology Program, MIT, Cambridge, USA
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  • ORCID record for Nezar Abdennur
Fritz Lekschas
3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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Chuck McCallum
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Kasper Dinkla
3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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Hendrik Strobelt
3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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Jacob M Luber
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
4Bioinformatics and Integrative Genomics Program, Harvard Medical School, Boston, MA, USA
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Scott Ouellette
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Alaleh Azhir
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Nikhil Kumar
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Jeewon Hwang
3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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Soohyun Lee
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Burak H Alver
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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  • ORCID record for Burak H Alver
Hanspeter Pfister
3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
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Leonid A Mirny
5Department of Physics, MIT, Cambridge, USA
6Institute for Medical Engineering and Science, MIT, Cambridge, USA
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  • ORCID record for Leonid A Mirny
Peter J Park
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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Nils Gehlenborg
1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
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  • ORCID record for Nils Gehlenborg
  • For correspondence: nils@hms.harvard.edu
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Article Information

doi 
https://doi.org/10.1101/121889
History 
  • October 30, 2017.

Article Versions

  • Version 1 (March 31, 2017 - 11:46).
  • You are currently viewing Version 2 of this article (October 30, 2017 - 12:04).
  • View Version 3, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Peter Kerpedjiev1,
  2. Nezar Abdennur2,
  3. Fritz Lekschas3,
  4. Chuck McCallum1,
  5. Kasper Dinkla3,
  6. Hendrik Strobelt3,
  7. Jacob M Luber1,4,
  8. Scott Ouellette1,
  9. Alaleh Azhir1,
  10. Nikhil Kumar1,
  11. Jeewon Hwang3,
  12. Soohyun Lee1,
  13. Burak H Alver1,
  14. Hanspeter Pfister3,
  15. Leonid A Mirny5,6,
  16. Peter J Park1 and
  17. Nils Gehlenborg1,*
  1. 1Department of Biomedical Informatics, Harvard Medical School, Boston, MA, USA
  2. 2Computational and Systems Biology Program, MIT, Cambridge, USA
  3. 3School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA
  4. 4Bioinformatics and Integrative Genomics Program, Harvard Medical School, Boston, MA, USA
  5. 5Department of Physics, MIT, Cambridge, USA
  6. 6Institute for Medical Engineering and Science, MIT, Cambridge, USA
  1. ↵*Correspondence should be addressed to Nils Gehlenborg (nils{at}hms.harvard.edu), Department of Biomedical Informatics, Countway Library, 10 Shattuck St, Boston, MA 02115, USA
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Posted October 30, 2017.
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HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps
Peter Kerpedjiev, Nezar Abdennur, Fritz Lekschas, Chuck McCallum, Kasper Dinkla, Hendrik Strobelt, Jacob M Luber, Scott Ouellette, Alaleh Azhir, Nikhil Kumar, Jeewon Hwang, Soohyun Lee, Burak H Alver, Hanspeter Pfister, Leonid A Mirny, Peter J Park, Nils Gehlenborg
bioRxiv 121889; doi: https://doi.org/10.1101/121889
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HiGlass: Web-based Visual Exploration and Analysis of Genome Interaction Maps
Peter Kerpedjiev, Nezar Abdennur, Fritz Lekschas, Chuck McCallum, Kasper Dinkla, Hendrik Strobelt, Jacob M Luber, Scott Ouellette, Alaleh Azhir, Nikhil Kumar, Jeewon Hwang, Soohyun Lee, Burak H Alver, Hanspeter Pfister, Leonid A Mirny, Peter J Park, Nils Gehlenborg
bioRxiv 121889; doi: https://doi.org/10.1101/121889

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