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Insight and Inference for DVARS

Soroosh Afyouni, Thomas E. Nichols
doi: https://doi.org/10.1101/125021
Soroosh Afyouni
aInstitute for Advanced Studies, University of Warwick, Coventry, CV4 7AL, UK
bInstitute for Digital Healthcare, WMG, University of Warwick, Coventry, CV4 7AL, UK
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Thomas E. Nichols
cOxford Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Population Health, University of Oxford, Oxford, OX3 7LF, UK
dWellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, OX3 7LF, UK
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  • For correspondence: s.afyouni@warwick.ac.uk thomas.nichols@bdi.ox.ac.uk
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Abstract

Estimates of functional connectivity using resting state functional Magnetic Resonance Imaging (rs-fMRI) are acutely sensitive to artifacts and large scale nuisance variation. As a result much effort is dedicated to preprocessing rs-fMRI data and using diagnostic measures to identify bad scans. One such diagnostic measure is DVARS, the spatial standard deviation of the data after temporal differencing. A limitation of DVARS however is the lack of concrete interpretation of the absolute values of DVARS, and finding a threshold to distinguish bad scans from good. In this work we describe a variance decomposition of the entire 4D dataset that shows DVARS to be just one of three sources of variation we refer to as D-var (closely linked to DVARS), S-var and E-var. D-var and S-var partition the variance at adjacent time points, while E-var accounts for edge effects; each can be used to make spatial and temporal summary diagnostic measures. Extending the partitioning to global (and non-global) signal leads to a rs-fMRI DSE ANOVA table, which decomposes the total and global variability into fast (D-var), slow (S-var) and edge (E-var) components. We find expected values for each component under nominal models, showing how D-var (and thus DVARS) scales with overall variability and is diminished by temporal autocorrelation. Finally we propose a null sampling distribution for DVARS-squared and robust methods to estimate this null model, allowing computation of DVARS p-values. We propose that these diagnostic time series, images, p-values and ANOVA table will provide a succinct summary of the quality of a rs-fMRI dataset that will support comparisons of datasets over preprocessing steps and between subjects.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted October 30, 2017.
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Insight and Inference for DVARS
Soroosh Afyouni, Thomas E. Nichols
bioRxiv 125021; doi: https://doi.org/10.1101/125021
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Insight and Inference for DVARS
Soroosh Afyouni, Thomas E. Nichols
bioRxiv 125021; doi: https://doi.org/10.1101/125021

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