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Early urinary candidate biomarker discovery in a rat thioacetamide-induced liver fibrosis model

Fanshuang Zhang, Yanying Ni, Yuan Yuan, Wei Yin, Youhe Gao
doi: https://doi.org/10.1101/125120
Fanshuang Zhang
1Department of Pathophysiology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, NO. 5 Dong Dan San Tiao, Dongcheng District, Beijing, China
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Yanying Ni
1Department of Pathophysiology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, NO. 5 Dong Dan San Tiao, Dongcheng District, Beijing, China
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Yuan Yuan
1Department of Pathophysiology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, NO. 5 Dong Dan San Tiao, Dongcheng District, Beijing, China
2Department of Pathology, Beijing Tiantan Hospital, Capital Medical University, NO. 6 Tian Tan Xi Li, Dongcheng District, Beijing, China
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Wei Yin
1Department of Pathophysiology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, NO. 5 Dong Dan San Tiao, Dongcheng District, Beijing, China
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Youhe Gao
1Department of Pathophysiology, Institute of Basic Medical Sciences Chinese Academy of Medical Sciences, School of Basic Medicine Peking Union Medical College, NO. 5 Dong Dan San Tiao, Dongcheng District, Beijing, China
3Department of Biochemistry and Molecular Biology, Beijing Normal University, Gene Engineering and Biotechnology Beijing Key Laboratory, NO. 19 Xin Jie Kou Wai Street, Haidian District, Beijing, China
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  • For correspondence: gaoyouhe@bnu.edu.cn
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Abstract

Biomarker is the change associated with the disease. Blood is relatively stable because of the homeostatic mechanisms of the body. However, urine accumulates changes of the body, which makes it a better early biomarker source. Liver fibrosis, which results from the deposition of extracellular matrix (ECM) components, is a reversible pathological condition, whereas cirrhosis, the end-stage of liver fibrosis, is irreversible. Consequently, noninvasive early biomarkers for fibrosis are desperately needed. In this study, differential urinary proteins were identified in the thioacetamide (TAA) liver fibrosis rat model using tandem mass tagging and two-dimensional liquid chromatography tandem mass spectrometry (2DLC-MS/MS). A total of 766 urinary proteins were identified, 143 and 118 of which were significantly changed in the TAA 1-week and 3-week groups, respectively. Multiple reaction monitoring (MRM)-targeted proteomics was used to further validate the abundant differentially expressed proteins in the TAA 1-week, 3-week, 6-week and 8-week groups. A total of 40 urinary proteins were statistically significant (fold change >2 and p<0.05), 15 of which had been previously reported as biomarkers of liver fibrosis, cirrhosis or other related diseases and 10 of which had been reported to be associated with the pathology and mechanism of liver fibrosis. These differential proteins were detected in urine before the alanine aminotransferase (ALT) and aspartate transaminase (AST) changes in the serum and before fibrosis was observed upon hematoxylin and eosin (HE) and Masson’s staining.

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Posted April 06, 2017.
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Early urinary candidate biomarker discovery in a rat thioacetamide-induced liver fibrosis model
Fanshuang Zhang, Yanying Ni, Yuan Yuan, Wei Yin, Youhe Gao
bioRxiv 125120; doi: https://doi.org/10.1101/125120
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Early urinary candidate biomarker discovery in a rat thioacetamide-induced liver fibrosis model
Fanshuang Zhang, Yanying Ni, Yuan Yuan, Wei Yin, Youhe Gao
bioRxiv 125120; doi: https://doi.org/10.1101/125120

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