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Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection

Maja Križnik, Marko Petek, David Dobnik, Živa Ramšak, Špela Baebler, Stephan Pollmann, Jan Kreuze, Jana Žel, Kristina Gruden
doi: https://doi.org/10.1101/130757
Maja Križnik
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
dJožef Stefan International Postgraduate School (IPS), Jamova 39. SI-1000 Ljubljana, Slovenia
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Marko Petek
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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David Dobnik
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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Živa Ramšak
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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Špela Baebler
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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Stephan Pollmann
bCentro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM)-Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus de Montegancedo UPM, Pozuelo de Alarcón, Madrid, 28223, Spain.
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Jan Kreuze
cGlobal Program of Integrated Crop and Systems Research, International Potato Center (CIP), Apartado 1558, Lima 12, Peru
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Jana Žel
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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Kristina Gruden
aDepartment of Biotechnology and Systems Biology, National Institute of Biology, Večna pot 111, SI-1000 Ljubljana, Slovenia.
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Abstract

Potato virus Y is the most economically important potato viral pathogen. We aimed at unraveling the roles of small RNAs (sRNAs) in the complex immune signaling network controlling the establishment of tolerant response of potato cv. Désirée to the virus. We constructed a sRNA regulatory network connecting sRNAs and their targets to link sRNA level responses to physiological processes. We discovered an interesting novel sRNAs-gibberellin regulatory circuit being activated as early as 3 days post inoculation before viral multiplication can be detected. Increased levels of miR167 and phasiRNA931 were reflected in decreased levels of transcripts involved in gibberellin biosynthesis. Moreover, decreased concentration of gibberellin confirmed this regulation. The functional relation between lower activity of gibberellin signaling and reduced disease severity was previously confirmed in Arabidopsis-virus interaction using knockout mutants. We further showed that this regulation is salicylic acid-dependent as the response of sRNA network was attenuated in salicylic acid-depleted transgenic counterpart NahG-Désirée expressing severe disease symptoms. Besides downregulation of gibberellin signaling, regulation of several other parts of sRNA network in tolerant Désirée revealed similarities to responses observed in mutualistic symbiotic interactions. The intertwining of different regulatory networks revealed shows how developmental signaling, disease symptom development and stress signaling can be balanced.

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Posted October 12, 2017.
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Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection
Maja Križnik, Marko Petek, David Dobnik, Živa Ramšak, Špela Baebler, Stephan Pollmann, Jan Kreuze, Jana Žel, Kristina Gruden
bioRxiv 130757; doi: https://doi.org/10.1101/130757
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Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection
Maja Križnik, Marko Petek, David Dobnik, Živa Ramšak, Špela Baebler, Stephan Pollmann, Jan Kreuze, Jana Žel, Kristina Gruden
bioRxiv 130757; doi: https://doi.org/10.1101/130757

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