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Parallel sequencing lives, or what makes large sequencing projects successful

View ORCID ProfileJavier Quilez, View ORCID ProfileEnrique Vidal, View ORCID ProfileFrançois Le Dily, View ORCID ProfileFrançois Serra, View ORCID ProfileYasmina Cuartero, View ORCID ProfileRalph Stadhouders, View ORCID ProfileThomas Graf, View ORCID ProfileMarc A. Marti-Renom, View ORCID ProfileMiguel Beato, View ORCID ProfileGuillaume Filion
doi: https://doi.org/10.1101/136358
Javier Quilez
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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Enrique Vidal
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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François Le Dily
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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François Serra
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
3CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
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Yasmina Cuartero
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
3CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
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Ralph Stadhouders
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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Thomas Graf
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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Marc A. Marti-Renom
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
3CNAG-CRG, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
4ICREA, Pg. Lluis Companys 23, 08010 Barcelona, Spain
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Miguel Beato
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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Guillaume Filion
1Gene Regulation, Stem Cells and Cancer Program, Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology (BIST), Dr. Aiguader 88, 08003 Barcelona, Spain
2Universitat Pompeu Fabra (UPF), Barcelona, Spain
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Abstract

T47D_rep2 and b1913e6c1_51720e9cf were two Hi-C samples. They were born and processed at the same time, yet their fates were very different. The life of b1913e6c1_51720e9cf was simple and fruitful, while that of T47D_rep2 was full of accidents and sorrow. At the heart of these differences lies the fact that b1913e6c1_51720e9cf was born under a lab culture of Documentation, Automation, Traceability, Autonomy and compliance with the FAIR Principles. Their lives are a lesson for those who wish to embark on the journey of managing high throughput sequencing data.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted August 29, 2017.
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Parallel sequencing lives, or what makes large sequencing projects successful
Javier Quilez, Enrique Vidal, François Le Dily, François Serra, Yasmina Cuartero, Ralph Stadhouders, Thomas Graf, Marc A. Marti-Renom, Miguel Beato, Guillaume Filion
bioRxiv 136358; doi: https://doi.org/10.1101/136358
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Parallel sequencing lives, or what makes large sequencing projects successful
Javier Quilez, Enrique Vidal, François Le Dily, François Serra, Yasmina Cuartero, Ralph Stadhouders, Thomas Graf, Marc A. Marti-Renom, Miguel Beato, Guillaume Filion
bioRxiv 136358; doi: https://doi.org/10.1101/136358

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