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SAVER: Gene expression recovery for UMI-based single cell RNA sequencing

View ORCID ProfileMo Huang, Jingshu Wang, Eduardo Torre, Hannah Dueck, Sydney Shaffer, Roberto Bonasio, John Murray, Arjun Raj, Mingyao Li, Nancy R. Zhang
doi: https://doi.org/10.1101/138677
Mo Huang
1Department of Statistics, University of Pennsylvania, Philadelphia, PA
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  • ORCID record for Mo Huang
Jingshu Wang
1Department of Statistics, University of Pennsylvania, Philadelphia, PA
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Eduardo Torre
2Department of Bioengineering, University of Pennsylvania, Philadelphia, PA
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Hannah Dueck
3Department of Genetics, University of Pennyslvania, Philadelphia, PA
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Sydney Shaffer
2Department of Bioengineering, University of Pennsylvania, Philadelphia, PA
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Roberto Bonasio
4Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA
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John Murray
3Department of Genetics, University of Pennyslvania, Philadelphia, PA
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Arjun Raj
2Department of Bioengineering, University of Pennsylvania, Philadelphia, PA
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Mingyao Li
5Department of Biostatistics and Epidemiology, University of Pennsylvania, Philadelphia, PA
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Nancy R. Zhang
1Department of Statistics, University of Pennsylvania, Philadelphia, PA
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  • For correspondence: nzh@wharton.upenn.edu
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Article Information

doi 
https://doi.org/10.1101/138677
History 
  • March 8, 2018.

Article Versions

  • Version 1 (May 16, 2017 - 19:42).
  • Version 2 (May 17, 2017 - 10:42).
  • You are viewing Version 3, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.

Author Information

  1. Mo Huang1,
  2. Jingshu Wang1,
  3. Eduardo Torre2,
  4. Hannah Dueck3,
  5. Sydney Shaffer2,
  6. Roberto Bonasio4,
  7. John Murray3,
  8. Arjun Raj2,
  9. Mingyao Li5 and
  10. Nancy R. Zhang1,*
  1. 1Department of Statistics, University of Pennsylvania, Philadelphia, PA
  2. 2Department of Bioengineering, University of Pennsylvania, Philadelphia, PA
  3. 3Department of Genetics, University of Pennyslvania, Philadelphia, PA
  4. 4Department of Cell and Developmental Biology, University of Pennsylvania, Philadelphia, PA
  5. 5Department of Biostatistics and Epidemiology, University of Pennsylvania, Philadelphia, PA
  1. ↵*Correspondence: Nancy R. Zhang nzh{at}wharton.upenn.edu (215) 898-8007 Department of Statistics The Wharton School University of Pennsylvania
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Posted March 08, 2018.
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SAVER: Gene expression recovery for UMI-based single cell RNA sequencing
Mo Huang, Jingshu Wang, Eduardo Torre, Hannah Dueck, Sydney Shaffer, Roberto Bonasio, John Murray, Arjun Raj, Mingyao Li, Nancy R. Zhang
bioRxiv 138677; doi: https://doi.org/10.1101/138677
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SAVER: Gene expression recovery for UMI-based single cell RNA sequencing
Mo Huang, Jingshu Wang, Eduardo Torre, Hannah Dueck, Sydney Shaffer, Roberto Bonasio, John Murray, Arjun Raj, Mingyao Li, Nancy R. Zhang
bioRxiv 138677; doi: https://doi.org/10.1101/138677

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