Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Reverse-Correlation Analysis of the Mechanosensation Circuit and Behavior in C. elegans Reveals Temporal and Spatial Encoding

Daniel A. Porto, John Giblin, Yiran Zhao, Hang Lu
doi: https://doi.org/10.1101/147363
Daniel A. Porto
1Interdisciplinary Bioengineering Program, Georgia Institute of Technology, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
John Giblin
2Department of Biomedical Engineering, Georgia Institute of Technology, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Yiran Zhao
2Department of Biomedical Engineering, Georgia Institute of Technology, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Hang Lu
1Interdisciplinary Bioengineering Program, Georgia Institute of Technology, USA
2Department of Biomedical Engineering, Georgia Institute of Technology, USA
3School of Chemical & Biomolecular Engineering, Georgia Institute of Technology, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • For correspondence: [email protected]
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Supplementary material
  • Preview PDF
Loading

Abstract

Animals must integrate the activity of multiple mechanoreceptors to navigate complex environments. In Caenorhabditis elegans, the general roles of the mechanosensory neurons have been defined, but most studies involve end-point or single-time-point measurements, and thus lack dynamical information. Here, we formulate a set of unbiased quantitative characterizations of the mechanosensory system by using reverse correlation analysis on behavior. We use a custom tracking, selective illumination, and optogenetics platform to compare two mechanosensory systems: the gentle-touch (TRNs) and harsh-touch (PVD) circuits. This method yields characteristic linear filters that allow for prediction of behavioral responses. The resulting filters are consistent with previous findings, and further provide new insights on the dynamics and spatial encoding of the systems. Our results suggest that the tiled network of the gentle-touch neurons has better resolution for spatial encoding than the harsh-touch neurons. Additionally, linear-nonlinear models can predict behavioral responses based only on sensory neuron activity. Our results capture the overall dynamics of behavior induced by the activation of sensory neurons, providing simple transformations that quantitatively characterize these systems. Furthermore, this platform can be extended to capture the behavioral dynamics induced by any neuron or other excitable cells in the animal.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted November 26, 2018.
Download PDF

Supplementary Material

Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Reverse-Correlation Analysis of the Mechanosensation Circuit and Behavior in C. elegans Reveals Temporal and Spatial Encoding
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Reverse-Correlation Analysis of the Mechanosensation Circuit and Behavior in C. elegans Reveals Temporal and Spatial Encoding
Daniel A. Porto, John Giblin, Yiran Zhao, Hang Lu
bioRxiv 147363; doi: https://doi.org/10.1101/147363
Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Reverse-Correlation Analysis of the Mechanosensation Circuit and Behavior in C. elegans Reveals Temporal and Spatial Encoding
Daniel A. Porto, John Giblin, Yiran Zhao, Hang Lu
bioRxiv 147363; doi: https://doi.org/10.1101/147363

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Bioengineering
Subject Areas
All Articles
  • Animal Behavior and Cognition (6024)
  • Biochemistry (13708)
  • Bioengineering (10437)
  • Bioinformatics (33163)
  • Biophysics (17112)
  • Cancer Biology (14180)
  • Cell Biology (20108)
  • Clinical Trials (138)
  • Developmental Biology (10868)
  • Ecology (16022)
  • Epidemiology (2067)
  • Evolutionary Biology (20348)
  • Genetics (13398)
  • Genomics (18634)
  • Immunology (13754)
  • Microbiology (32164)
  • Molecular Biology (13393)
  • Neuroscience (70079)
  • Paleontology (526)
  • Pathology (2191)
  • Pharmacology and Toxicology (3741)
  • Physiology (5866)
  • Plant Biology (12020)
  • Scientific Communication and Education (1814)
  • Synthetic Biology (3367)
  • Systems Biology (8166)
  • Zoology (1842)