Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Indexcov: fast coverage quality control for whole-genome sequencing

Brent S. Pedersen, Ryan L. Collins, Michael E. Talkowski, Aaron R. Quinlan
doi: https://doi.org/10.1101/148296
Brent S. Pedersen
1Department of Human Genetics, University of Utah, Salt Lake City, UT
3USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Ryan L. Collins
4Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA
6Program in Medical and Population Genetics and Stanley Center for Psychiatric Research, Broad Institute, Cambridge, MA
7Program in Bioinformatics and Integrative Genomics, Division of Medical Sciences, Harvard Medical School, Boston, MA.
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Michael E. Talkowski
4Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA
5Department of Neurology, Harvard Medical School, Boston, MA
6Program in Medical and Population Genetics and Stanley Center for Psychiatric Research, Broad Institute, Cambridge, MA
7Program in Bioinformatics and Integrative Genomics, Division of Medical Sciences, Harvard Medical School, Boston, MA.
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
Aaron R. Quinlan
1Department of Human Genetics, University of Utah, Salt Lake City, UT
2Department of Biomedical Informatics, University of Utah, Salt Lake City, UT
3USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Preview PDF
Loading

Article Information

doi 
https://doi.org/10.1101/148296
History 
  • June 9, 2017.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Brent S. Pedersen1,3,+,
  2. Ryan L. Collins4,6,7,
  3. Michael E. Talkowski4,5,6,7 and
  4. Aaron R. Quinlan1,2,3,+
  1. 1Department of Human Genetics, University of Utah, Salt Lake City, UT
  2. 2Department of Biomedical Informatics, University of Utah, Salt Lake City, UT
  3. 3USTAR Center for Genetic Discovery, University of Utah, Salt Lake City, UT
  4. 4Center for Genomic Medicine, Massachusetts General Hospital, Boston, MA
  5. 5Department of Neurology, Harvard Medical School, Boston, MA
  6. 6Program in Medical and Population Genetics and Stanley Center for Psychiatric Research, Broad Institute, Cambridge, MA
  7. 7Program in Bioinformatics and Integrative Genomics, Division of Medical Sciences, Harvard Medical School, Boston, MA.
  1. ↵+To whom correspondence should be addressed.
Back to top
PreviousNext
Posted June 09, 2017.
Download PDF
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Indexcov: fast coverage quality control for whole-genome sequencing
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Indexcov: fast coverage quality control for whole-genome sequencing
Brent S. Pedersen, Ryan L. Collins, Michael E. Talkowski, Aaron R. Quinlan
bioRxiv 148296; doi: https://doi.org/10.1101/148296
Digg logo Reddit logo Twitter logo Facebook logo Google logo LinkedIn logo Mendeley logo
Citation Tools
Indexcov: fast coverage quality control for whole-genome sequencing
Brent S. Pedersen, Ryan L. Collins, Michael E. Talkowski, Aaron R. Quinlan
bioRxiv 148296; doi: https://doi.org/10.1101/148296

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Genomics
Subject Areas
All Articles
  • Animal Behavior and Cognition (4079)
  • Biochemistry (8751)
  • Bioengineering (6467)
  • Bioinformatics (23315)
  • Biophysics (11720)
  • Cancer Biology (9135)
  • Cell Biology (13227)
  • Clinical Trials (138)
  • Developmental Biology (7404)
  • Ecology (11360)
  • Epidemiology (2066)
  • Evolutionary Biology (15078)
  • Genetics (10390)
  • Genomics (14001)
  • Immunology (9110)
  • Microbiology (22026)
  • Molecular Biology (8773)
  • Neuroscience (47318)
  • Paleontology (350)
  • Pathology (1419)
  • Pharmacology and Toxicology (2480)
  • Physiology (3701)
  • Plant Biology (8044)
  • Scientific Communication and Education (1427)
  • Synthetic Biology (2206)
  • Systems Biology (6009)
  • Zoology (1247)