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ATP sensing in living plant cells reveals tissue gradients and stress dynamics of energy physiology

Valentina De Col, Philippe Fuchs, Thomas Nietzel, Marlene Elsässer, Chia Pao Voon, Alessia Candeo, Ingo Seeliger, Mark D. Fricker, Christopher Grefen, Ian Max Møller, Andrea Bassi, Boon Leong Lim, Marco Zancani, Andreas J. Meyer, Alex Costa, Stephan Wagner, Markus Schwarzländer
doi: https://doi.org/10.1101/153163
Valentina De Col
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
2 Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, I-33100 Udine, Italy
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Philippe Fuchs
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
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Thomas Nietzel
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
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Marlene Elsässer
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
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Chia Pao Voon
3 School of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China
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Alessia Candeo
4 Dipartimento di Fisica, Politecnico di Milano, I-20133 Milano, Italy
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Ingo Seeliger
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
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Mark D. Fricker
5 Department of Plant Sciences, University of Oxford, Oxford, OX1 3RB, UK
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Christopher Grefen
6 Centre for Plant Molecular Biology, Developmental Genetics, University of Tübingen, DE-72076 Tübingen, Germany
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Ian Max Møller
7 Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark
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Andrea Bassi
4 Dipartimento di Fisica, Politecnico di Milano, I-20133 Milano, Italy
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Boon Leong Lim
3 School of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China
8 State Key Laboratory of Agrobiotechnology, Chinese University of Hong Kong, Shatin, Hong Kong, China
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Marco Zancani
2 Department of Agricultural, Food, Environmental and Animal Sciences, University of Udine, I-33100 Udine, Italy
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Andreas J. Meyer
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
10 Bioeconomy Science Center, c/o Forschungszentrum Jülich, DE-52425 Jülich, Germany
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Alex Costa
9 Dipartimento di Bioscienze, Università degli Studi di Milano, I-20133 Milano, Italy
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Stephan Wagner
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
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  • For correspondence: stephan.wagner@uni-bonn.de
Markus Schwarzländer
1 Institute of Crop Science and Resource Conservation (INRES), University of Bonn, DE-53113 Bonn, Germany
10 Bioeconomy Science Center, c/o Forschungszentrum Jülich, DE-52425 Jülich, Germany
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  • For correspondence: stephan.wagner@uni-bonn.de
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Abstract

Growth and development of plants is ultimately driven by light energy captured through photosynthesis. ATP acts as universal cellular energy cofactor fuelling all life processes, including gene expression, metabolism, and transport. Despite a mechanistic understanding of ATP biochemistry, ATP dynamics in the living plant have been largely elusive. Here we establish live MgATP2− assessment in plants using the fluorescent protein biosensor ATeam1.03-nD/nA. We generate Arabidopsis sensor lines and investigate the sensor in vitro under conditions appropriate for the plant cytosol. We establish an assay for ATP fluxes in isolated mitochondria, and demonstrate that the sensor responds rapidly and reliably to MgATP2− changes in planta. A MgATP2− map of the Arabidopsis seedling highlights different MgATP2− concentrations between tissues and in individual cell types, such as root hairs. Progression of hypoxia reveals substantial plasticity of ATP homeostasis in seedlings, demonstrating that ATP dynamics can be monitored in the living plant.

One-sentence Summary Sensing of MgATP2− by fluorimetry and microscopy allows dissection of ATP fluxes of isolated organelles, and dynamics of cytosolic MgATP2− in vivo.

Funding Agencies This work was supported by the Deutsche Forschungsgemeinschaft (DFG) through the Emmy-Noether programme (SCHW1719/1-1; M.S. and GR4251/1-1; C.G.), the Research Training Group GRK 2064 (M.S.; A.J.M.), the Priority Program SPP1710 (A.J.M.) and a grant (SCHW1719/5-1; M.S.) as part of the package PAK918. The Seed Fund grant CoSens from the Bioeconomy Science Center, NRW (A.J.M.; M.S.) is gratefully acknowledged. The scientific activities of the Bioeconomy Science Center were financially supported by the Ministry of Innovation, Science and Research within the framework of the NRW Strategieprojekt BioSC (No. 313/323-400-002 13). A.Co. received funding by the Ministero dell’Istruzione, dell’Università e della Ricerca through the FIRB 2010 programme (RBFR10S1LJ_001) and Piano di Sviluppo di Ateneo 2015 (Università degli Studi di Milano). M.Z. received funding by the Ministero dell’Istruzione, dell’Università e della Ricerca (Italy) through the PRIN 2010 programme (PRIN2010CSJX4F). S.W. and T.N. received travel support by the Deutscher Akademischer Austauschdienst (DAAD). V.D.C. was supported by the European Social Fund, Operational Programme 2007/2013, and an Erasmus+ Traineeship grant. M.D.F was supported by The Human Frontier Science Program (RPG0053/2012), and the Leverhulme Foundation (RPG-2015-437). I.M.M. was supported by a grant from the Danish Council for Independent Research - Natural Sciences. V.C.P. was supported by the Innovation and Technology Fund (Funding Support to Partner State Key Laboratories in Hong Kong) of the HKSAR.

Abbreviations AAC – ADP/ATP carrier; AK – adenylate kinase; cAT – carboxyatractyloside; CCCP – carbonyl cyanide m-chlorophenyl hydrazone; CFP – cyan fluorescent protein; CLSM – confocal laser scanning microscopy; ETC – electron transport chain; FRET – Förster Resonance Energy Transfer; LSFM – light sheet fluorescence microscopy.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted June 23, 2017.
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ATP sensing in living plant cells reveals tissue gradients and stress dynamics of energy physiology
Valentina De Col, Philippe Fuchs, Thomas Nietzel, Marlene Elsässer, Chia Pao Voon, Alessia Candeo, Ingo Seeliger, Mark D. Fricker, Christopher Grefen, Ian Max Møller, Andrea Bassi, Boon Leong Lim, Marco Zancani, Andreas J. Meyer, Alex Costa, Stephan Wagner, Markus Schwarzländer
bioRxiv 153163; doi: https://doi.org/10.1101/153163
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ATP sensing in living plant cells reveals tissue gradients and stress dynamics of energy physiology
Valentina De Col, Philippe Fuchs, Thomas Nietzel, Marlene Elsässer, Chia Pao Voon, Alessia Candeo, Ingo Seeliger, Mark D. Fricker, Christopher Grefen, Ian Max Møller, Andrea Bassi, Boon Leong Lim, Marco Zancani, Andreas J. Meyer, Alex Costa, Stephan Wagner, Markus Schwarzländer
bioRxiv 153163; doi: https://doi.org/10.1101/153163

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