Skip to main content
bioRxiv
  • Home
  • About
  • Submit
  • ALERTS / RSS
Advanced Search
New Results

Geometric classification of brain network dynamics via conic derivative discriminants

View ORCID ProfileMatthew F. Singh, Todd S. Braver, ShiNung Ching
doi: https://doi.org/10.1101/201905
Matthew F. Singh
1Department of Neuroscience, Washington University in St. Louis, St. Louis, MO, USA
2Department of Psychology, Washington University in St. Louis, St. Louis, MO, USA
3Department of Electrical and Systems Engineering, Washington University in St. Louis, St. Louis, MO, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • ORCID record for Matthew F. Singh
  • For correspondence: f.singh@wustl.edu
Todd S. Braver
2Department of Psychology, Washington University in St. Louis, St. Louis, MO, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
ShiNung Ching
3Department of Electrical and Systems Engineering, Washington University in St. Louis, St. Louis, MO, USA
4Department of Biomedical Engineering, Washington University in St. Louis, St. Louis, MO, USA
  • Find this author on Google Scholar
  • Find this author on PubMed
  • Search for this author on this site
  • Abstract
  • Full Text
  • Info/History
  • Metrics
  • Preview PDF
Loading

Abstract

Over the past decade, pattern decoding techniques have granted neuroscientists improved anatomical specificity in mapping neural representations associated with function and cognition. Dynamical patterns are of particular interest, as evidenced by the proliferation and success of frequency domain methods that reveal structured spatiotemporal rhythmic brain activity. One drawback of such approaches, however, is the need to estimate spectral power, which limits the temporal resolution of classification. We propose an alternative method that enables classification of dynamical patterns with high temporal fidelity. The key feature of the method is a conversion of time-series into their temporal derivatives. By doing so, dynamically-coded information may be revealed in terms of geometric patterns in the phase space of the derivative signal. We derive a geometric classifier for this problem which simplifies into a straightforward calculation in terms of covariances. We demonstrate the relative advantages and disadvantages of the technique with simulated data and benchmark its performance with an EEG dataset of covert spatial attention. By mapping the weights anatomically we reveal a retinotopic organization of covert spatial attention. We especially highlight the ability of the method to provide strong group-level classification performance compared to existing benchmarks, while providing information that is synergistic to classical spectral-based techniques. The robustness and sensitivity of the method to noise is also examined relative to spectral-based techniques. The proposed classification technique enables decoding of dynamic patterns with high temporal resolution, performs favorably to benchmark methods, and facilitates anatomical inference.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Back to top
PreviousNext
Posted October 16, 2017.
Download PDF
Email

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Enter multiple addresses on separate lines or separate them with commas.
Geometric classification of brain network dynamics via conic derivative discriminants
(Your Name) has forwarded a page to you from bioRxiv
(Your Name) thought you would like to see this page from the bioRxiv website.
CAPTCHA
This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.
Share
Geometric classification of brain network dynamics via conic derivative discriminants
Matthew F. Singh, Todd S. Braver, ShiNung Ching
bioRxiv 201905; doi: https://doi.org/10.1101/201905
Reddit logo Twitter logo Facebook logo LinkedIn logo Mendeley logo
Citation Tools
Geometric classification of brain network dynamics via conic derivative discriminants
Matthew F. Singh, Todd S. Braver, ShiNung Ching
bioRxiv 201905; doi: https://doi.org/10.1101/201905

Citation Manager Formats

  • BibTeX
  • Bookends
  • EasyBib
  • EndNote (tagged)
  • EndNote 8 (xml)
  • Medlars
  • Mendeley
  • Papers
  • RefWorks Tagged
  • Ref Manager
  • RIS
  • Zotero
  • Tweet Widget
  • Facebook Like
  • Google Plus One

Subject Area

  • Neuroscience
Subject Areas
All Articles
  • Animal Behavior and Cognition (4237)
  • Biochemistry (9149)
  • Bioengineering (6788)
  • Bioinformatics (24029)
  • Biophysics (12141)
  • Cancer Biology (9548)
  • Cell Biology (13797)
  • Clinical Trials (138)
  • Developmental Biology (7642)
  • Ecology (11718)
  • Epidemiology (2066)
  • Evolutionary Biology (15519)
  • Genetics (10651)
  • Genomics (14335)
  • Immunology (9494)
  • Microbiology (22864)
  • Molecular Biology (9107)
  • Neuroscience (49049)
  • Paleontology (355)
  • Pathology (1485)
  • Pharmacology and Toxicology (2572)
  • Physiology (3850)
  • Plant Biology (8339)
  • Scientific Communication and Education (1472)
  • Synthetic Biology (2297)
  • Systems Biology (6197)
  • Zoology (1302)