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Plasmodium falciparum population genetic complexity influences transcriptional profile and immune recognition of highly related genotypic clusters
Amy K. Bei, Daniel B. Larremore, Kazutoyo Miura, Ababacar Diouf, Nicholas K. Baro, Rachel F. Daniels, Allison Griggs, Eli L. Moss, Daniel E. Neafsey, Awa B. Deme, Mouhamad Sy, Stephen Schaffner, Ambroise D. Ahouidi, Daouda Ndiaye, Tandakha Dieye, Souleymane Mboup, Caroline O. Buckee, Sarah K. Volkman, Carole A. Long, Dyann F. Wirth
doi: https://doi.org/10.1101/2020.01.03.894220
Amy K. Bei
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
3Laboratory of Parasitology and Mycology, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
4Yale School of Public Health, Laboratory of Epidemiology and Public Health, New Haven, USA
Daniel B. Larremore
5Department of Computer Science, University of Colorado Boulder, Boulder, CO, USA
6BioFrontiers Institute, University Colorado at Boulder, Boulder, CO, USA
7Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, MA, USA
8Center for Communicable Disease Dynamics, Harvard TH Chan School of Public Health, Boston, Massachusetts, USA
9Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM, USA
Kazutoyo Miura
10Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA
Ababacar Diouf
10Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA
Nicholas K. Baro
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
Rachel F. Daniels
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Allison Griggs
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Eli L. Moss
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Daniel E. Neafsey
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Awa B. Deme
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
3Laboratory of Parasitology and Mycology, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
Mouhamad Sy
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
3Laboratory of Parasitology and Mycology, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
Stephen Schaffner
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Ambroise D. Ahouidi
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
Daouda Ndiaye
3Laboratory of Parasitology and Mycology, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
Tandakha Dieye
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
Souleymane Mboup
2Laboratory of Bacteriology and Virology, Le Dantec Hospital, Faculty of Medicine and Pharmacy, Cheikh Anta Diop University, Dakar, Senegal
12Institut de Recherche en Santé, de Surveillance Epidemiologique et de Formations, Dakar, Senegal
Caroline O. Buckee
7Department of Epidemiology, Harvard TH Chan School of Public Health, Boston, MA, USA
8Center for Communicable Disease Dynamics, Harvard TH Chan School of Public Health, Boston, Massachusetts, USA
Sarah K. Volkman
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Carole A. Long
10Laboratory of Malaria and Vector Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA
Dyann F. Wirth
1Department of Immunology & Infectious Diseases, Harvard TH Chan School of Public Health, Boston, MA, USA
11Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA
Article usage
Posted January 03, 2020.
Plasmodium falciparum population genetic complexity influences transcriptional profile and immune recognition of highly related genotypic clusters
Amy K. Bei, Daniel B. Larremore, Kazutoyo Miura, Ababacar Diouf, Nicholas K. Baro, Rachel F. Daniels, Allison Griggs, Eli L. Moss, Daniel E. Neafsey, Awa B. Deme, Mouhamad Sy, Stephen Schaffner, Ambroise D. Ahouidi, Daouda Ndiaye, Tandakha Dieye, Souleymane Mboup, Caroline O. Buckee, Sarah K. Volkman, Carole A. Long, Dyann F. Wirth
bioRxiv 2020.01.03.894220; doi: https://doi.org/10.1101/2020.01.03.894220
Plasmodium falciparum population genetic complexity influences transcriptional profile and immune recognition of highly related genotypic clusters
Amy K. Bei, Daniel B. Larremore, Kazutoyo Miura, Ababacar Diouf, Nicholas K. Baro, Rachel F. Daniels, Allison Griggs, Eli L. Moss, Daniel E. Neafsey, Awa B. Deme, Mouhamad Sy, Stephen Schaffner, Ambroise D. Ahouidi, Daouda Ndiaye, Tandakha Dieye, Souleymane Mboup, Caroline O. Buckee, Sarah K. Volkman, Carole A. Long, Dyann F. Wirth
bioRxiv 2020.01.03.894220; doi: https://doi.org/10.1101/2020.01.03.894220
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