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- January 14, 2020.
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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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- Alexander A. Aksenov1,2,#,
- Ivan Laponogov3,#,
- Zheng Zhang1,
- Sophie LF Doran3,
- Ilaria Belluomo3,
- Dennis Veselkov4,
- Wout Bittremieux1,2,35,
- Louis Felix Nothias1,2,
- Mélissa Nothias-Esposito1,2,
- Katherine N. Maloney1,27,
- Biswapriya B. Misra5,
- Alexey V. Melnik1,
- Kenneth L. Jones II1,
- Kathleen Dorrestein1,2,
- Morgan Panitchpakdi1,
- Madeleine Ernst1,33,
- Justin J.J. van der Hooft1,38,
- Mabel Gonzalez6,
- Chiara Carazzone6,
- Adolfo Amézquita7,
- Chris Callewaert8,9,
- James Morton9,
- Robert Quinn10,
- Amina Bouslimani1,2,
- Andrea Albarracín Orio11,
- Daniel Petras1,2,
- Andrea M. Smania31,32,
- Sneha P. Couvillion12,
- Meagan C. Burnet12,
- Carrie D. Nicora12,
- Erika Zink12,
- Thomas O. Metz12,
- Viatcheslav Artaev13,
- Elizabeth Humston-Fulmer13,
- Rachel Gregor37,
- Michael M. Meijler37,
- Itzhak Mizrahi36,
- Stav Eyal36,
- Brooke Anderson15,
- Rachel Dutton15,
- Raphaël Lugan16,
- Pauline Le Boulch16,
- Yann Guitton17,
- Stephanie Prevost17,
- Audrey Poirier17,
- Gaud Dervilly17,
- Bruno Le Bizec17,
- Aaron Fait14,
- Noga Sikron Persi14,
- Chao Song14,
- Kelem Gashu14,
- Roxana Coras18,
- Monica Guma18,
- Julia Manasson21,
- Jose U. Scher21,
- Dinesh Barupal19,
- Saleh Alseekh20,29,
- Alisdair Fernie20,29,
- Reza Mirnezami28,
- Vasilis Vasiliou22,
- Robin Schmid23,
- Roman S. Borisov24,
- Larisa N. Kulikova25,
- Rob Knight9,26,34,35,
- Mingxun Wang1,2,
- George B Hanna3,
- Pieter C. Dorrestein1,2,9,26,* and
- Kirill Veselkov3,**
- 1Skaggs of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, San Diego, CA
- 2Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of San Diego, California, 9500 Gilman Dr. La Jolla CA 92093
- 3Department of Surgery and Cancer, Imperial College London, South Kensington Campus, London SW7 2AZ
- 4Intelligify Limited, 160 Kemp House, City Road, London, United Kingdom, EC1V 2NX
- 5Center for Precision Medicine, Department of Internal Medicine, Section of Molecular Medicine, Wake Forest School of Medicine, Medical Center Boulevard, Winston-Salem NC 27157
- 6Department of Chemistry, Universidad de los Andes, Bogotá, Colombia
- 7Department of Biological Sciences, Universidad de los Andes, Bogotá, Colombia
- 8Center for Microbial Ecology and Technology, Coupure Links 653, 9000 Ghent, Belgium
- 9Department of Pediatrics, University of California, San Diego, La Jolla, CA, USA
- 10Department of Biochemistry and Molecular Biology, Michigan State University, 603 Wilson Rd, East Lansing, MI 48824
- 11IRNASUS, Universidad Católica de Córdoba, CONICET, Facultad de Ciencias Agropecuarias. Córdoba, Argentina
- 12Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA 99352
- 13LECO Corporation, 3000 Lakeview Avenue, St. Joseph, MI 49085
- 14The French Associates Institute for Agriculture and Biotechnology of Dryland, The Jacob Blaustein Institutes for Desert Research, Ben Gurion University of the Negev, 84990 Sede Boqer Campus, Israel
- 15Division of Biological Sciences, University of San Diego, California, 9500 Gilman Dr. La Jolla CA 92093
- 16UMR Qualisud, Université d’Avignon et des Pays du Vaucluse, Agrosciences, 84000 Avignon, France
- 17Laboratoire d’Etude des Résidus et Contaminants dans les Aliments (LABERCA), Oniris, INRA, 44307 Nantes, France
- 18Division of Rheumatology, Department of Medicine, University of California San Diego, La Jolla, CA
- 19NIH West-Coast Metabolomics Center for Compound Identification, University of California Davis, Davis CA USA
- 20Max-Planck Institute for Molecular Plant Physiology, 14476, Potsdam-Golm, Germany
- 21Division of Rheumatology, Department of Medicine, New York University School of Medicine, New York, NY
- 22Department of Environmental Health Sciences, Yale School of Public Health, Yale University, New Haven, CT, USA
- 23Institute of Inorganic and Analytical Chemistry, Corrensstr. 28/30, 48149 Münster, Germany
- 24A.V.Topchiev Institute of Petrochemical Synthesis RAS, 29 Leninsky pr., Moscow, 119991 Russian Federation
- 25Peoples’ Friendship University of Russia (RUDN University), 6 Miklukho-Maklaya St, Moscow, 117198 Russian Federation
- 26UCSD center for Microbiome Innovation, University of San Diego, California, 9500 Gilman Dr. La Jolla CA 92093
- 27Department of Chemistry, Point Loma Nazarene University, 3900 Lomaland Drive, San Diego, CA, 92106 USA
- 28Department of Colorectal Surgery, Royal Free Hospital NHS Foundation Trust, Pond Street, Hampstead, London NW3 2QG
- 29Center of Plant Systems Biology and Biotechnology (CPSBB), Plovdiv, Bulgaria
- 30University of Antwerp, Antwerp, Belgium
- 31Universidad Nacional de Córdoba, Facultad de Ciencias Químicas, Departamento de Química Biológica Ranwel Caputto, Córdoba, Argentina
- 32CONICET, Universidad Nacional de Córdoba, Centro de Investigaciones en Química Biológica de Córdoba (CIQUIBIC), Córdoba, Argentina
- 33Center for Newborn Screening, Department of Congenital Disorders, Statens Serum Institut, Copenhagen, Denmark
- 34Department of Bioengineering, University of California, San Diego, La Jolla, CA, USA
- 35Department of Computer Science, University of California, San Diego, La Jolla, CA, USA
- 36Department of Life Sciences and the National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva, Israel
- 37Department of Chemistry and the National Institute for Biotechnology in the Negev, Ben-Gurion University of the Negev, Beer-Sheva, Israel
- 38Bioinformatics Group, Wageningen University, Droevendaalsesteeg 1, 6708 PB, Wageningen, the Netherlands