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Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics and proteomics
Patrick T. West, Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Yue Clare Lou, Brian A. Firek, Robyn Baker, Alexander D. Johnson, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
doi: https://doi.org/10.1101/2020.03.23.004093
Patrick T. West
1Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
Samantha L. Peters
2Graduate School of Genome Science and Technology, The University of Tennessee, Knoxville, Knoxville, TN, United States
8Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States
Matthew R. Olm
3Department of Microbiology and Immunology, Stanford University School of Medicine, Stanford, California 94305, USA
Feiqiao B. Yu
4Chan Zuckerberg Biohub, San Francisco, CA, USA
Yue Clare Lou
1Department of Plant and Microbial Biology, University of California, Berkeley, CA, USA
Brian A. Firek
5Department of Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA
Robyn Baker
6Division of Newborn Medicine, Magee-Womens Hospital of UPMC, Pittsburgh, PA,USA
Alexander D. Johnson
4Chan Zuckerberg Biohub, San Francisco, CA, USA
7Department of Microbiology and Immunology, University of California, San Francisco, San Francisco, CA, USA
Michael J. Morowitz
5Department of Surgery, University of Pittsburgh School of Medicine, Pittsburgh, PA, USA
Robert L. Hettich
2Graduate School of Genome Science and Technology, The University of Tennessee, Knoxville, Knoxville, TN, United States
8Chemical Sciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, United States
Jillian F. Banfield
4Chan Zuckerberg Biohub, San Francisco, CA, USA
9Department of Earth and Planetary Science, University of California, Berkeley, CA, USA
10Department of Environmental Science, Policy, and Management, University of California, Berkeley, CA, USA
11Earth Sciences Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA
Posted March 25, 2020.
Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics and proteomics
Patrick T. West, Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Yue Clare Lou, Brian A. Firek, Robyn Baker, Alexander D. Johnson, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
bioRxiv 2020.03.23.004093; doi: https://doi.org/10.1101/2020.03.23.004093
Genetic and behavioral adaptation of Candida parapsilosis to the microbiome of hospitalized infants revealed by in situ genomics, transcriptomics and proteomics
Patrick T. West, Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Yue Clare Lou, Brian A. Firek, Robyn Baker, Alexander D. Johnson, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
bioRxiv 2020.03.23.004093; doi: https://doi.org/10.1101/2020.03.23.004093
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