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Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins

View ORCID ProfileYong Zhang, Wanjun Zhao, View ORCID ProfileYonghong Mao, Yaohui Chen, Shisheng Wang, Yi Zhong, Tao Su, Meng Gong, Dan Du, Xiaofeng Lu, Jingqiu Cheng, View ORCID ProfileHao Yang
doi: https://doi.org/10.1101/2020.03.28.013276
Yong Zhang
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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Wanjun Zhao
3Department of Thyroid Surgery, West China Hospital, Sichuan University, Chengdu 610041, China
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Yonghong Mao
4Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu 610041, China
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Yaohui Chen
4Department of Thoracic Surgery, West China Hospital, Sichuan University, Chengdu 610041, China
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Shisheng Wang
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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Yi Zhong
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
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Tao Su
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
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Meng Gong
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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Dan Du
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
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Xiaofeng Lu
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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Jingqiu Cheng
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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  • For correspondence: yanghao@scu.edu.cn jqcheng@scu.edu.cn
Hao Yang
1Key Laboratory of Transplant Engineering and Immunology, MOH; West China-Washington Mitochondria and Metabolism Research Center; Frontiers Science Center for Disease-related Molecular Network, West China Hospital, Sichuan University, Chengdu 610041, China
2Regenerative Medical Research Center, West China Hospital, Sichuan University, Chengdu 610041, China
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  • ORCID record for Hao Yang
  • For correspondence: yanghao@scu.edu.cn jqcheng@scu.edu.cn
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Summary

The glycoprotein spike (S) on the surface of SARS-CoV-2 is a determinant for viral invasion and host immune response. Herein, we characterized the site-specific N-glycosylation of S protein at the level of intact glycopeptides. All 22 potential N-glycosites were identified in the S-protein protomer and were found to be preserved among the 753 SARS-CoV-2 genome sequences. The glycosites exhibited glycoform heterogeneity as expected for a human cell-expressed protein subunits. We identified masses that correspond to 157 N-glycans, primarily of the complex type. In contrast, the insect cell-expressed S protein contained 38 N-glycans, primarily of the high-mannose type. Our results revealed that the glycan types were highly determined by the differential processing of N-glycans among human and insect cells. This N-glycosylation landscape and the differential N-glycan patterns among distinct host cells are expected to shed light on the infection mechanism and present a positive view for the development of vaccines and targeted drugs.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • manuscript revised;Figures revised; author affiliations updated; Supplemental files updated.

  • Abbreviations

    ACE2
    angiotensin-converting enzyme II
    Cryo-EM
    cryoelectron microscopy
    E
    envelope protein
    HCoV-NL63
    human coronavirus NL63
    M
    membrane protein
    MS
    mass spectrometry
    MERS-CoV
    Middle East respiratory syndrome coronavirus
    N
    nucleocapsid protein
    RBD
    receptor-binding domain
    S
    spike protein
    SARS-CoV-2
    severe acute respiratory syndrome coronavirus
    SCE
    stepped collision energy
    Zic-HILIC
    zwitterionic hydrophilic interaction liquid chromatography
  • Copyright 
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    Posted June 30, 2020.
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    Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins
    Yong Zhang, Wanjun Zhao, Yonghong Mao, Yaohui Chen, Shisheng Wang, Yi Zhong, Tao Su, Meng Gong, Dan Du, Xiaofeng Lu, Jingqiu Cheng, Hao Yang
    bioRxiv 2020.03.28.013276; doi: https://doi.org/10.1101/2020.03.28.013276
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    Site-specific N-glycosylation Characterization of Recombinant SARS-CoV-2 Spike Proteins
    Yong Zhang, Wanjun Zhao, Yonghong Mao, Yaohui Chen, Shisheng Wang, Yi Zhong, Tao Su, Meng Gong, Dan Du, Xiaofeng Lu, Jingqiu Cheng, Hao Yang
    bioRxiv 2020.03.28.013276; doi: https://doi.org/10.1101/2020.03.28.013276

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