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Deregulated mito-nuclear communication alters chromatin plasticity and differentiation potential of mesenchymal stem cells upon ageing

Andromachi Pouikli, Swati Parekh, Monika Maleszewska, Maarouf Baghdadi, Ignacio Tripodi, Chrysa Nikopoulou, Kat Folz-Donahue, Yvonne Hinze, Andrea Mesaros, Patrick Giavalisco, Robin Dowell, Linda Partridge, View ORCID ProfilePeter Tessarz
doi: https://doi.org/10.1101/2020.04.02.022293
Andromachi Pouikli
1Max-Planck Research Group “Chromatin and Ageing”, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Swati Parekh
1Max-Planck Research Group “Chromatin and Ageing”, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Monika Maleszewska
1Max-Planck Research Group “Chromatin and Ageing”, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Maarouf Baghdadi
2Dept. of Biological Mechanisms of Ageing, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Ignacio Tripodi
3Computer Science, University of Colorado, Boulder, 1111 Engineering Dr., Boulder, CO 80309, USA
4BioFrontiers Institute, University of Colorado, Boulder, 3415 Colorado Ave., Boulder, CO, 80303, USA
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Chrysa Nikopoulou
1Max-Planck Research Group “Chromatin and Ageing”, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Kat Folz-Donahue
5FACS and Imaging Core Facility, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Yvonne Hinze
6Metabolomics Core Facility, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Andrea Mesaros
7Phenotyping Core Facility, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Patrick Giavalisco
6Metabolomics Core Facility, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
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Robin Dowell
3Computer Science, University of Colorado, Boulder, 1111 Engineering Dr., Boulder, CO 80309, USA
4BioFrontiers Institute, University of Colorado, Boulder, 3415 Colorado Ave., Boulder, CO, 80303, USA
8Molecular, Cellular & Developmental Biology, University of Colorado, Boulder, 1945 Colorado Avenue, 347 UCB, Boulder, CO 80309, USA
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Linda Partridge
2Dept. of Biological Mechanisms of Ageing, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
9Cologne Excellence Cluster on Stress Responses in ageing-associated Diseases (CECAD), Joseph-Stelzmann-Str. 26, 50931 Cologne, Germany
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Peter Tessarz
1Max-Planck Research Group “Chromatin and Ageing”, Max Planck Institute for Biology of Ageing, Joseph-Stelzmann-Str. 9b, 50931 Cologne, Germany
9Cologne Excellence Cluster on Stress Responses in ageing-associated Diseases (CECAD), Joseph-Stelzmann-Str. 26, 50931 Cologne, Germany
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  • ORCID record for Peter Tessarz
  • For correspondence: ptessarz@age.mpg.de
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ABSTRACT

Ageing is accompanied by a general decline in the function of many cellular pathways, with metabolic alterations, epigenetic modifications, and stem cell exhaustion representing three important hallmarks of the ageing process. However, whether these pathways are causally or functionally related at a molecular level remains poorly understood. Here, we use bone marrow-derived mesenchymal stem cells (MSCs) isolated from young and old mice to address how age-dependent changes in metabolism and epigenetics are linked and how they impact on the ageing transcriptome and differentiation potential. Given that MSCs maintain specific age-associated properties even under prolonged culture conditions, such as the age-dependent decrease in osteogenic differentiation, they are an excellent model to investigate in vitro the connection of ageing hallmarks on a mechanistic level. In this study, we demonstrate that upon ageing, osteogenic potential of MSCs declines as a consequence of deregulated mito-nuclear communication, mediated by decreased levels of the citrate carrier (CiC). Age-dependent down-regulation of CiC results in acetyl-CoA trapping within mitochondria, hypo-acetylation of histones and chromatin compaction. Together, these changes lead to an altered transcriptional output and are responsible for the reduced differentiation capacity into osteoblasts. Strikingly, short-term supplementation of aged cells with acetate, an exogenous source for cytosolic acetyl-CoA production, rescues not only the age-associated reduction of histone acetylation, but also the osteogenesis defect, representing a potential target for in vitro MSC rejuvenation.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted April 03, 2020.
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Deregulated mito-nuclear communication alters chromatin plasticity and differentiation potential of mesenchymal stem cells upon ageing
Andromachi Pouikli, Swati Parekh, Monika Maleszewska, Maarouf Baghdadi, Ignacio Tripodi, Chrysa Nikopoulou, Kat Folz-Donahue, Yvonne Hinze, Andrea Mesaros, Patrick Giavalisco, Robin Dowell, Linda Partridge, Peter Tessarz
bioRxiv 2020.04.02.022293; doi: https://doi.org/10.1101/2020.04.02.022293
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Deregulated mito-nuclear communication alters chromatin plasticity and differentiation potential of mesenchymal stem cells upon ageing
Andromachi Pouikli, Swati Parekh, Monika Maleszewska, Maarouf Baghdadi, Ignacio Tripodi, Chrysa Nikopoulou, Kat Folz-Donahue, Yvonne Hinze, Andrea Mesaros, Patrick Giavalisco, Robin Dowell, Linda Partridge, Peter Tessarz
bioRxiv 2020.04.02.022293; doi: https://doi.org/10.1101/2020.04.02.022293

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