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Analysis of SARS-CoV-2 Antibodies in COVID-19 Convalescent Plasma using a Coronavirus Antigen Microarray

Rafael R. de Assis, Aarti Jain, Rie Nakajima, Algis Jasinskas, Jiin Felgner, Joshua M. Obiero, Oluwasanmi Adenaiye, Sheldon Tai, Filbert Hong, Philip Norris, Mars Stone, Graham Simmons, Anil Bagri, Martin Schreiber, Andreas Buser, Andreas Holbro, Manuel Battegay, Donald K. Milton, Prometheus Study Group, Huw Davies, Laurence M. Corash, Michael P. Busch, Philip L. Felgner, View ORCID ProfileSaahir Khan
doi: https://doi.org/10.1101/2020.04.15.043364
Rafael R. de Assis
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Aarti Jain
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Rie Nakajima
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Algis Jasinskas
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Jiin Felgner
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Joshua M. Obiero
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Oluwasanmi Adenaiye
2Institute for Applied Environmental Health, School of Public Health, University of Maryland, College Park, MD
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Sheldon Tai
2Institute for Applied Environmental Health, School of Public Health, University of Maryland, College Park, MD
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Filbert Hong
2Institute for Applied Environmental Health, School of Public Health, University of Maryland, College Park, MD
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Philip Norris
3Vitalant Research Institute, San Francisco, CA
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Mars Stone
3Vitalant Research Institute, San Francisco, CA
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Graham Simmons
3Vitalant Research Institute, San Francisco, CA
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Anil Bagri
4Cerus Corporation, Concord, CA
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Martin Schreiber
5Department of Surgery, Oregon Health & Science University, Portland, OR
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Andreas Buser
6Regional Blood Transfusion Service, Swiss Red Cross, University Hospital Basel, University of Basel, Basel, Switzerland
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Andreas Holbro
6Regional Blood Transfusion Service, Swiss Red Cross, University Hospital Basel, University of Basel, Basel, Switzerland
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Manuel Battegay
6Regional Blood Transfusion Service, Swiss Red Cross, University Hospital Basel, University of Basel, Basel, Switzerland
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Donald K. Milton
2Institute for Applied Environmental Health, School of Public Health, University of Maryland, College Park, MD
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Huw Davies
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Laurence M. Corash
4Cerus Corporation, Concord, CA
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Michael P. Busch
3Vitalant Research Institute, San Francisco, CA
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Philip L. Felgner
1Department of Physiology and Biophysics, School of Medicine, University of California Irvine, Irvine, CA
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Saahir Khan
8Division of Infectious Diseases, Department of Medicine, University of California Irvine Health, Orange, CA
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  • ORCID record for Saahir Khan
  • For correspondence: saahirk@uci.edu
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Abstract

The current practice for diagnosis of COVID-19, based on SARS-CoV-2 PCR testing of pharyngeal or respiratory specimens in a symptomatic patient at high epidemiologic risk, likely underestimates the true prevalence of infection. Serologic methods can more accurately estimate the disease burden by detecting infections missed by the limited testing performed to date. Here, we describe the validation of a coronavirus antigen microarray containing immunologically significant antigens from SARS-CoV-2, in addition to SARS-CoV, MERS-CoV, common human coronavirus strains, and other common respiratory viruses. A comparison of antibody profiles detected on the array from control sera collected prior to the SARS-CoV-2 pandemic versus convalescent blood specimens from virologically confirmed COVID-19 cases demonstrates complete discrimination of these two groups. This array can be used as a diagnostic tool, as an epidemiologic tool to more accurately estimate the disease burden of COVID-19, and as a research tool to correlate antibody responses with clinical outcomes.

Competing Interest Statement

The coronavirus antigen microarray is intellectual property of the Regents of the University of California that is licensed for commercialization to Nanommune Inc. (Irvine, CA), a private company for which Philip L. Felgner is the largest shareholder and several co-authors (de Assis, Jain, Nakajima, Jasinskas, Obiero, Davies, and Khan) also own shares. Nanommune Inc. has a business partnership with Sino Biological Inc. (Beijing, China) which expressed and purified the antigens used in this study. The convalescent plasma used in this study was collected for clinical use by independent blood centers using licensed plasma or platelet processing systems manufactured by Cerus Corporation, for which multiple authors (Corash, Bagri) are shareholders and employees.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted April 17, 2020.
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Analysis of SARS-CoV-2 Antibodies in COVID-19 Convalescent Plasma using a Coronavirus Antigen Microarray
Rafael R. de Assis, Aarti Jain, Rie Nakajima, Algis Jasinskas, Jiin Felgner, Joshua M. Obiero, Oluwasanmi Adenaiye, Sheldon Tai, Filbert Hong, Philip Norris, Mars Stone, Graham Simmons, Anil Bagri, Martin Schreiber, Andreas Buser, Andreas Holbro, Manuel Battegay, Donald K. Milton, Prometheus Study Group, Huw Davies, Laurence M. Corash, Michael P. Busch, Philip L. Felgner, Saahir Khan
bioRxiv 2020.04.15.043364; doi: https://doi.org/10.1101/2020.04.15.043364
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Analysis of SARS-CoV-2 Antibodies in COVID-19 Convalescent Plasma using a Coronavirus Antigen Microarray
Rafael R. de Assis, Aarti Jain, Rie Nakajima, Algis Jasinskas, Jiin Felgner, Joshua M. Obiero, Oluwasanmi Adenaiye, Sheldon Tai, Filbert Hong, Philip Norris, Mars Stone, Graham Simmons, Anil Bagri, Martin Schreiber, Andreas Buser, Andreas Holbro, Manuel Battegay, Donald K. Milton, Prometheus Study Group, Huw Davies, Laurence M. Corash, Michael P. Busch, Philip L. Felgner, Saahir Khan
bioRxiv 2020.04.15.043364; doi: https://doi.org/10.1101/2020.04.15.043364

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