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Multiple environmental parameters impact core lipid cyclization in Sulfolobus acidocaldarius

View ORCID ProfileAlec Cobban, View ORCID ProfileYujiao Zhang, View ORCID ProfileAlice Zhou, View ORCID ProfileYuki Weber, Ann Pearson, View ORCID ProfileWilliam D. Leavitt
doi: https://doi.org/10.1101/2020.04.23.032631
Alec Cobban
aDepartment of Earth Sciences, Dartmouth College, Hanover, NH 03755 USA
bDepartment of Biological Sciences, Dartmouth College, Hanover, NH 03755 USA
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  • For correspondence: alec.bradley.cobban@dartmouth.edu william.d.leavitt@dartmouth.edu
Yujiao Zhang
aDepartment of Earth Sciences, Dartmouth College, Hanover, NH 03755 USA
cState Key Laboratory of Organic Geochemistry, Guangzhou Institute of Geochemistry, Chinese Academy of Sciences, Guangzhou 510640 China
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Alice Zhou
aDepartment of Earth Sciences, Dartmouth College, Hanover, NH 03755 USA
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Yuki Weber
dDepartment of Earth & Planetary Sciences, Harvard University, Cambridge, MA 02138 USA
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Ann Pearson
dDepartment of Earth & Planetary Sciences, Harvard University, Cambridge, MA 02138 USA
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William D. Leavitt
aDepartment of Earth Sciences, Dartmouth College, Hanover, NH 03755 USA
bDepartment of Biological Sciences, Dartmouth College, Hanover, NH 03755 USA
eDepartment of Chemistry, Dartmouth College, Hanover, NH 03755 USA
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  • For correspondence: alec.bradley.cobban@dartmouth.edu william.d.leavitt@dartmouth.edu
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ABSTRACT

Environmental reconstructions based on microbial lipids require understanding the coupling between environmental conditions and membrane physiology. The paleotemperature proxy TEX86 is built on the observation that archaea alter the number of five- and six-membered rings in the hydrophobic core of their glycerol dibiphytanyl glycerol tetraether (GDGT) membrane lipids when growing at different temperatures. However, recent work with these archaea also highlights a role for other factors, such as pH or energy availability in determining the degree of core lipid cyclization. To better understand the role of these variables we cultivated a model Crenarchaeon, Sulfolobus acidocaldarius, over a range in temperature, pH, oxygen flux, or agitation speed, and quantified the changes in growth rate, biomass yield, and core lipid compositions. The average degree of cyclization in core lipids correlated with growth rate under most conditions. When considered alongside other experimental findings from both the thermoacidophilic and mesoneutrophilic archaea, the results suggest the cyclization of archaeal lipids records a universal response to energy availability at the cellular level. Although we isolated the effects of individual parameters, there remains a need for multi-factor experiments (e.g., pH + temperature + redox) to establish a robust framework to interpret biomarker records of environmental change.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Corrected corresponding author contact information

  • https://doi.org/10.6084/m9.figshare.c.4863426.v1

  • https://git.dartmouth.edu/leavitt_lab/cobban-saci-lipids-batch-and-fed-batch-2020

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-ND 4.0 International license.
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Posted April 24, 2020.
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Multiple environmental parameters impact core lipid cyclization in Sulfolobus acidocaldarius
Alec Cobban, Yujiao Zhang, Alice Zhou, Yuki Weber, Ann Pearson, William D. Leavitt
bioRxiv 2020.04.23.032631; doi: https://doi.org/10.1101/2020.04.23.032631
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Multiple environmental parameters impact core lipid cyclization in Sulfolobus acidocaldarius
Alec Cobban, Yujiao Zhang, Alice Zhou, Yuki Weber, Ann Pearson, William D. Leavitt
bioRxiv 2020.04.23.032631; doi: https://doi.org/10.1101/2020.04.23.032631

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