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In silico detection of SARS-CoV-2 specific B-cell epitopes and validation in ELISA for serological diagnosis of COVID-19
View ORCID ProfileIsabelle Q. Phan, Sandhya Subramanian, David Kim, Lauren Carter, Neil King, Ivan Anishchenko, Lynn K. Barrett, Justin Craig, Logan Tillery, Roger Shek, Whitney E. Harrington, David M. Koelle, Anna Wald, Jim Boonyaratanakornkit, Nina Isoherranen, Alexander L. Greninger, Keith R. Jerome, Helen Chu, Bart Staker, Lance Stewart, Peter J. Myler, View ORCID ProfileWesley C. Van Voorhis
doi: https://doi.org/10.1101/2020.05.22.111526
Isabelle Q. Phan
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
2Center for Global Infectious Disease Research, Seattle Children’s Research Institute, Seattle, Washington, USA
Sandhya Subramanian
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
2Center for Global Infectious Disease Research, Seattle Children’s Research Institute, Seattle, Washington, USA
David Kim
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
3Department of Biochemistry and Institute for Protein Design (IPD), University of Washington, Seattle, Washington, USA
4Howard Hughes Medical Institute, University of Washington, Seattle, Washington, USA
Lauren Carter
3Department of Biochemistry and Institute for Protein Design (IPD), University of Washington, Seattle, Washington, USA
Neil King
3Department of Biochemistry and Institute for Protein Design (IPD), University of Washington, Seattle, Washington, USA
Ivan Anishchenko
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
3Department of Biochemistry and Institute for Protein Design (IPD), University of Washington, Seattle, Washington, USA
Lynn K. Barrett
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
Justin Craig
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
Logan Tillery
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
Roger Shek
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
Whitney E. Harrington
2Center for Global Infectious Disease Research, Seattle Children’s Research Institute, Seattle, Washington, USA
9Department of Epidemiology, University of Washington, Seattle, Washington, USA
David M. Koelle
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
7Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA
8Department of Laboratory Medicine, University of Washington, Seattle, Washington, USA
12Benaroya Research Institute, Seattle, Washington, USA
15Department of Global Health, University of Washington, Seattle, Washington, USA
Anna Wald
6Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
7Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA
8Department of Laboratory Medicine, University of Washington, Seattle, Washington, USA
9Department of Epidemiology, University of Washington, Seattle, Washington, USA
Jim Boonyaratanakornkit
6Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
7Vaccine and Infectious Diseases Division, Fred Hutchinson Cancer Research Center, Seattle, Washington, USA
Nina Isoherranen
10Department of Pharmaceutics, University of Washington, Seattle, Washington, USA
Alexander L. Greninger
8Department of Laboratory Medicine, University of Washington, Seattle, Washington, USA
Keith R. Jerome
8Department of Laboratory Medicine, University of Washington, Seattle, Washington, USA
Helen Chu
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
Bart Staker
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
2Center for Global Infectious Disease Research, Seattle Children’s Research Institute, Seattle, Washington, USA
Lance Stewart
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
3Department of Biochemistry and Institute for Protein Design (IPD), University of Washington, Seattle, Washington, USA
Peter J. Myler
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
2Center for Global Infectious Disease Research, Seattle Children’s Research Institute, Seattle, Washington, USA
13Department of Medical Education and Biomedical Informatics & Department of Global Health, University of Washington, Seattle, Washington, USA
Wesley C. Van Voorhis
1Seattle Structural Genomics Center for Infectious Disease (SSGCID), Seattle, Washington, USA
5Center for Emerging and Re-emerging Infectious Diseases (CERID), Division of Allergy and Infectious Diseases, Department of Medicine, University of Washington, Seattle, Washington, USA
14Department of Microbiology, University of Washington, Seattle, Washington, USA
15Department of Global Health, University of Washington, Seattle, Washington, USA
Posted May 25, 2020.
In silico detection of SARS-CoV-2 specific B-cell epitopes and validation in ELISA for serological diagnosis of COVID-19
Isabelle Q. Phan, Sandhya Subramanian, David Kim, Lauren Carter, Neil King, Ivan Anishchenko, Lynn K. Barrett, Justin Craig, Logan Tillery, Roger Shek, Whitney E. Harrington, David M. Koelle, Anna Wald, Jim Boonyaratanakornkit, Nina Isoherranen, Alexander L. Greninger, Keith R. Jerome, Helen Chu, Bart Staker, Lance Stewart, Peter J. Myler, Wesley C. Van Voorhis
bioRxiv 2020.05.22.111526; doi: https://doi.org/10.1101/2020.05.22.111526
In silico detection of SARS-CoV-2 specific B-cell epitopes and validation in ELISA for serological diagnosis of COVID-19
Isabelle Q. Phan, Sandhya Subramanian, David Kim, Lauren Carter, Neil King, Ivan Anishchenko, Lynn K. Barrett, Justin Craig, Logan Tillery, Roger Shek, Whitney E. Harrington, David M. Koelle, Anna Wald, Jim Boonyaratanakornkit, Nina Isoherranen, Alexander L. Greninger, Keith R. Jerome, Helen Chu, Bart Staker, Lance Stewart, Peter J. Myler, Wesley C. Van Voorhis
bioRxiv 2020.05.22.111526; doi: https://doi.org/10.1101/2020.05.22.111526
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