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The TFIID subunit Taf4 is required for pancreatic beta cell function and identity

Thomas Kleiber, Guillaume Davidson, Gabrielle Mengus, Igor Martianov, Irwin Davidson
doi: https://doi.org/10.1101/2020.05.23.111898
Thomas Kleiber
1Institut de Génétique et de Biologie Moléculaire et Cellulaire. BP 163, 67404 Illkirch Cedex, C.U. Strasbourg, France
2Centre National de la Recherche Scientifique, UMR7104
3Institut National de la Santé et de la Recherche Médicale, U1258
4Université de Strasbourg
5Danish Cancer Society Research Center, Strandboulevarden 49, 2100 Copenhagen, Danmark
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Guillaume Davidson
1Institut de Génétique et de Biologie Moléculaire et Cellulaire. BP 163, 67404 Illkirch Cedex, C.U. Strasbourg, France
2Centre National de la Recherche Scientifique, UMR7104
3Institut National de la Santé et de la Recherche Médicale, U1258
4Université de Strasbourg
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Gabrielle Mengus
1Institut de Génétique et de Biologie Moléculaire et Cellulaire. BP 163, 67404 Illkirch Cedex, C.U. Strasbourg, France
2Centre National de la Recherche Scientifique, UMR7104
3Institut National de la Santé et de la Recherche Médicale, U1258
4Université de Strasbourg
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Igor Martianov
1Institut de Génétique et de Biologie Moléculaire et Cellulaire. BP 163, 67404 Illkirch Cedex, C.U. Strasbourg, France
2Centre National de la Recherche Scientifique, UMR7104
3Institut National de la Santé et de la Recherche Médicale, U1258
4Université de Strasbourg
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Irwin Davidson
1Institut de Génétique et de Biologie Moléculaire et Cellulaire. BP 163, 67404 Illkirch Cedex, C.U. Strasbourg, France
2Centre National de la Recherche Scientifique, UMR7104
3Institut National de la Santé et de la Recherche Médicale, U1258
4Université de Strasbourg
6Plateforme GenomEast, infrastructure France Génomique.
7Equipe Labélisée Lingue National contre le Cancer
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  • For correspondence: irwin@igbmc.fr
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Abstract

We selectively inactivated the Taf4 subunit of general transcription factor TFIID in adult murine pancreatic beta cells (BCs). Taf4 inactivation rapidly diminishes expression of critical genes involved in BC function leading to increased glycaemia, lowered plasma insulin levels, defective glucose-stimulated insulin secretion and in the longer term reduced BC mass through apoptosis of a subpopulation of BCs. Nevertheless, glycaemia and blood insulin levels are stabilised after 11 weeks with mutant animals showing long term survival. Bulk RNA-seq and ATAC-seq together with single cell RNA-seq on isolated Langerhans islets show that Taf4 loss leads to a remodelling of chromatin accessibility and gene expression not only in targeted BCs, but also alpha and delta cells. One week after Taf4-loss, cells with mixed BC, alpha and/or delta cell identities were observed as well as a BC population trans-differentiating into alpha-like cells. Computational analysis defines how known critical BC and alpha cell determinants may act in combination with additional transcription factors and the NuRF chromatin remodelling complex to promote BC trans-differentiation.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • The authors declare no potential conflicts of interest.

  • This version corrects an error in the description of Fig.2 and comprises a reworded Introduction and Discussion.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted August 17, 2020.
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The TFIID subunit Taf4 is required for pancreatic beta cell function and identity
Thomas Kleiber, Guillaume Davidson, Gabrielle Mengus, Igor Martianov, Irwin Davidson
bioRxiv 2020.05.23.111898; doi: https://doi.org/10.1101/2020.05.23.111898
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The TFIID subunit Taf4 is required for pancreatic beta cell function and identity
Thomas Kleiber, Guillaume Davidson, Gabrielle Mengus, Igor Martianov, Irwin Davidson
bioRxiv 2020.05.23.111898; doi: https://doi.org/10.1101/2020.05.23.111898

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