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Shared SARS-CoV-2 diversity suggests localised transmission of minority variants
View ORCID ProfileKatrina A. Lythgoe, View ORCID ProfileMatthew Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes, Monique Andersson, Newton Otecko, Emma L. Wise, Nathan Moore, Jessica Lynch, Stephen Kidd, Nicholas Cortes, Matilde Mori, Anita Justice, Angie Green, M. Azim Ansari, Lucie Abeler-Dörner, Catrin E. Moore, Tim E. A. Peto, Robert Shaw, Peter Simmonds, David Buck, John A. Todd, on behalf of OVSG Analysis Group, David Bonsall, Christophe Fraser, View ORCID ProfileTanya Golubchik
doi: https://doi.org/10.1101/2020.05.28.118992
Katrina A. Lythgoe
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Matthew Hall
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Luca Ferretti
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Mariateresa de Cesare
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
George MacIntyre-Cockett
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
Amy Trebes
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
Monique Andersson
3Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headington, Oxford, OX3 9DU, UK
Newton Otecko
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Emma L. Wise
4Hampshire Hospitals NHS Foundation Trust, Basingstoke and North Hampshire Hospital, Basingstoke, RG24 9NA, UK
6School of Biosciences and Medicine, University of Surrey, Guildford, GU2 7XH, UK
Nathan Moore
4Hampshire Hospitals NHS Foundation Trust, Basingstoke and North Hampshire Hospital, Basingstoke, RG24 9NA, UK
Jessica Lynch
4Hampshire Hospitals NHS Foundation Trust, Basingstoke and North Hampshire Hospital, Basingstoke, RG24 9NA, UK
Stephen Kidd
4Hampshire Hospitals NHS Foundation Trust, Basingstoke and North Hampshire Hospital, Basingstoke, RG24 9NA, UK
Nicholas Cortes
4Hampshire Hospitals NHS Foundation Trust, Basingstoke and North Hampshire Hospital, Basingstoke, RG24 9NA, UK
Matilde Mori
7School of Medicine, University of Southampton, Southampton, SO17 1BJ, UK
Anita Justice
3Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headington, Oxford, OX3 9DU, UK
Angie Green
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
M. Azim Ansari
5Peter Medawar Building for Pathogen Research, University of Oxford, OX1 3SY, UK
Lucie Abeler-Dörner
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Catrin E. Moore
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
Tim E. A. Peto
3Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headington, Oxford, OX3 9DU, UK
Robert Shaw
3Oxford University Hospitals NHS Foundation Trust, John Radcliffe Hospital, Headington, Oxford, OX3 9DU, UK
Peter Simmonds
5Peter Medawar Building for Pathogen Research, University of Oxford, OX1 3SY, UK
David Buck
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
John A. Todd
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
David Bonsall
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
Christophe Fraser
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
Tanya Golubchik
1Big Data Institute, Nuffield Department of Medicine, University of Oxford, Old Road Campus, Oxford OX3 7FL, UK
2Wellcome Centre for Human Genetics, Nuffield Department of Medicine, NIHR Biomedical Research Centre, University of Oxford, Old Road Campus, Oxford OX3 7BN, UK
Article usage
Posted June 02, 2020.
Shared SARS-CoV-2 diversity suggests localised transmission of minority variants
Katrina A. Lythgoe, Matthew Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes, Monique Andersson, Newton Otecko, Emma L. Wise, Nathan Moore, Jessica Lynch, Stephen Kidd, Nicholas Cortes, Matilde Mori, Anita Justice, Angie Green, M. Azim Ansari, Lucie Abeler-Dörner, Catrin E. Moore, Tim E. A. Peto, Robert Shaw, Peter Simmonds, David Buck, John A. Todd, on behalf of OVSG Analysis Group, David Bonsall, Christophe Fraser, Tanya Golubchik
bioRxiv 2020.05.28.118992; doi: https://doi.org/10.1101/2020.05.28.118992
Shared SARS-CoV-2 diversity suggests localised transmission of minority variants
Katrina A. Lythgoe, Matthew Hall, Luca Ferretti, Mariateresa de Cesare, George MacIntyre-Cockett, Amy Trebes, Monique Andersson, Newton Otecko, Emma L. Wise, Nathan Moore, Jessica Lynch, Stephen Kidd, Nicholas Cortes, Matilde Mori, Anita Justice, Angie Green, M. Azim Ansari, Lucie Abeler-Dörner, Catrin E. Moore, Tim E. A. Peto, Robert Shaw, Peter Simmonds, David Buck, John A. Todd, on behalf of OVSG Analysis Group, David Bonsall, Christophe Fraser, Tanya Golubchik
bioRxiv 2020.05.28.118992; doi: https://doi.org/10.1101/2020.05.28.118992
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