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A Parasite Coat Protein Binds Suramin to Confer Drug Resistance

Johan Zeelen, Monique van Straaten, Joseph Verdi, Alexander Hempelmann, Hamidreza Hashemi, Kathryn Perez, Philip D. Jeffrey, Silvan Hälg, Natalie Wiedemar, Pascal Mäser, F. Nina Papavasiliou, View ORCID ProfileC. Erec Stebbins
doi: https://doi.org/10.1101/2020.06.04.134106
Johan Zeelen
1Division of Structural Biology of Infection and Immunity, German Cancer Research Center
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Monique van Straaten
1Division of Structural Biology of Infection and Immunity, German Cancer Research Center
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Joseph Verdi
1Division of Structural Biology of Infection and Immunity, German Cancer Research Center
2Division of Immune Diversity, German Cancer Research Center, Heidelberg, Germany
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Alexander Hempelmann
1Division of Structural Biology of Infection and Immunity, German Cancer Research Center
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Hamidreza Hashemi
2Division of Immune Diversity, German Cancer Research Center, Heidelberg, Germany
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Kathryn Perez
3Protein Expression and Purification Core Facility, EMBL Heidelberg, Meyerhofstraße 1, Heidelberg, Germany
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Philip D. Jeffrey
4Department of Molecular Biology, Princeton University, Princeton, New Jersey, USA
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Silvan Hälg
5Swiss Tropical and Public Health Institute, Basel CH-4002, Switzerland
6University of Basel, Basel CH-4001, Switzerland
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Natalie Wiedemar
5Swiss Tropical and Public Health Institute, Basel CH-4002, Switzerland
6University of Basel, Basel CH-4001, Switzerland
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Pascal Mäser
5Swiss Tropical and Public Health Institute, Basel CH-4002, Switzerland
6University of Basel, Basel CH-4001, Switzerland
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F. Nina Papavasiliou
2Division of Immune Diversity, German Cancer Research Center, Heidelberg, Germany
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C. Erec Stebbins
1Division of Structural Biology of Infection and Immunity, German Cancer Research Center
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  • ORCID record for C. Erec Stebbins
  • For correspondence: e.stebbins@dkfz-heidelberg.de
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Abstract

Suramin has been a primary early-stage treatment for African trypanosomiasis for nearly one hundred years. Recent studies revealed that trypanosome strains that express the Variant Surface Glycoprotein VSGsur possess heightened resistance to suramin. We show here that VSGsur binds tightly to suramin, other VSGs do not, and that together with VSG13 it defines a structurally divergent subgroup of these coat proteins. The co-crystal structure of VSGsur with suramin reveals that the chemically symmetric drug binds within a large cavity in the VSG homodimer asymmetrically, primarily through contacts of its central benzene rings. Structure-based, loss-of-contact mutations in VSGsur significantly decrease the affinity to suramin and lead to a loss of the resistance phenotype. Altogether, these data show that the resistance phenotype is dependent on the binding of suramin to VSGsur, establishing that the VSG proteins can possess functionality beyond their role in antigenic variation.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted June 05, 2020.
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A Parasite Coat Protein Binds Suramin to Confer Drug Resistance
Johan Zeelen, Monique van Straaten, Joseph Verdi, Alexander Hempelmann, Hamidreza Hashemi, Kathryn Perez, Philip D. Jeffrey, Silvan Hälg, Natalie Wiedemar, Pascal Mäser, F. Nina Papavasiliou, C. Erec Stebbins
bioRxiv 2020.06.04.134106; doi: https://doi.org/10.1101/2020.06.04.134106
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A Parasite Coat Protein Binds Suramin to Confer Drug Resistance
Johan Zeelen, Monique van Straaten, Joseph Verdi, Alexander Hempelmann, Hamidreza Hashemi, Kathryn Perez, Philip D. Jeffrey, Silvan Hälg, Natalie Wiedemar, Pascal Mäser, F. Nina Papavasiliou, C. Erec Stebbins
bioRxiv 2020.06.04.134106; doi: https://doi.org/10.1101/2020.06.04.134106

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