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Limited inhibition of multiple nodes in a driver network blocks metastasis

View ORCID ProfileAli E. Yesilkanal, Dongbo Yang, Payal Tiwari, Alan U. Sabino, Jiyoung Lee, Xiao-He Xie, Siqi Sun, Christopher Dann, Ethan Steinberg, Timothy Stuhlmiller, Casey Frankenberger, Elizabeth Goldsmith, Gary L. Johnson, Alexandre F. Ramos, View ORCID ProfileMarsha R. Rosner
doi: https://doi.org/10.1101/2020.06.05.137117
Ali E. Yesilkanal
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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  • ORCID record for Ali E. Yesilkanal
Dongbo Yang
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Payal Tiwari
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Alan U. Sabino
2Instituto do Câncer do Estado de São Paulo, Faculdade de Medicina and Escola de Artes, Ciências e Humanidades; University of São Paulo, Brazil
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Jiyoung Lee
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Xiao-He Xie
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Siqi Sun
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Christopher Dann
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Ethan Steinberg
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Timothy Stuhlmiller
3Department of Pharmacology, University of North Carolina in Chapel Hill, Chapel Hill, NC 27599
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Casey Frankenberger
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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Elizabeth Goldsmith
4UT Southwestern, Dallas, Texas
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Gary L. Johnson
3Department of Pharmacology, University of North Carolina in Chapel Hill, Chapel Hill, NC 27599
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Alexandre F. Ramos
2Instituto do Câncer do Estado de São Paulo, Faculdade de Medicina and Escola de Artes, Ciências e Humanidades; University of São Paulo, Brazil
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  • For correspondence: m-rosner@uchicago.edu alex.ramos@usp.br
Marsha R. Rosner
1Ben May Department for Cancer Research, University of Chicago, Chicago, IL 60637
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  • ORCID record for Marsha R. Rosner
  • For correspondence: m-rosner@uchicago.edu alex.ramos@usp.br
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ABSTRACT

Metastasis suppression by high-dose, multi-drug targeting is largely unsuccessful due to network heterogeneity and compensatory network activation. Here we show that targeting driver network signaling capacity by limited inhibition of its core pathways is a more effective anti-metastatic strategy. This principle underlies the action of a physiological metastasis suppressor, Raf Kinase Inhibitory Protein, which moderately decreases stress-regulated MAP kinase network activity, reducing the output to metastatic transcription factor BACH1 and motility-related target genes. We developed a low-dose four-drug mimic that blocks metastatic colonization in mouse breast cancer models and increases survival. Experiments and network flow modeling show: 1) limited inhibition of multiple pathways is required to overcome variation in MAPK network topology and suppress signaling output across heterogeneous tumor cells, and 2) restricting inhibition of individual kinases dissipates surplus signal, preventing threshold activation of compensatory kinase networks. This low-dose multi-drug approach to decrease signaling capacity of driver networks represents a transformative, clinically-relevant strategy for anti-metastatic treatment.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted June 07, 2020.
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Limited inhibition of multiple nodes in a driver network blocks metastasis
Ali E. Yesilkanal, Dongbo Yang, Payal Tiwari, Alan U. Sabino, Jiyoung Lee, Xiao-He Xie, Siqi Sun, Christopher Dann, Ethan Steinberg, Timothy Stuhlmiller, Casey Frankenberger, Elizabeth Goldsmith, Gary L. Johnson, Alexandre F. Ramos, Marsha R. Rosner
bioRxiv 2020.06.05.137117; doi: https://doi.org/10.1101/2020.06.05.137117
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Limited inhibition of multiple nodes in a driver network blocks metastasis
Ali E. Yesilkanal, Dongbo Yang, Payal Tiwari, Alan U. Sabino, Jiyoung Lee, Xiao-He Xie, Siqi Sun, Christopher Dann, Ethan Steinberg, Timothy Stuhlmiller, Casey Frankenberger, Elizabeth Goldsmith, Gary L. Johnson, Alexandre F. Ramos, Marsha R. Rosner
bioRxiv 2020.06.05.137117; doi: https://doi.org/10.1101/2020.06.05.137117

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