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Hitchhiking on condensed chromatin promotes plasmid persistence in yeast without perturbing chromosome function

Hemant Kumar Prajapati, Deepanshu Kumar, Xian-Mei Yang, Chien-Hui Ma, Priyanka Mittal, View ORCID ProfileMakkuni Jayaram, View ORCID ProfileSantanu K. Ghosh
doi: https://doi.org/10.1101/2020.06.08.139568
Hemant Kumar Prajapati
1National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, 20892
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Deepanshu Kumar
2Department of Biosciences and Bioengineering, Indian Institute of Technology, Bombay, Powai, Mumbai-400076, India
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Xian-Mei Yang
3Section of Molecular Genetics and Microbiology, University of Texas, Austin, TX 78712, USA
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Chien-Hui Ma
3Section of Molecular Genetics and Microbiology, University of Texas, Austin, TX 78712, USA
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Priyanka Mittal
1National Institute of Child Health and Human Development, National Institutes of Health, Bethesda, MD, 20892
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Makkuni Jayaram
3Section of Molecular Genetics and Microbiology, University of Texas, Austin, TX 78712, USA
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  • ORCID record for Makkuni Jayaram
  • For correspondence: santanughosh@iitb.ac.in jayaram@austin.utexas.edu
Santanu K. Ghosh
2Department of Biosciences and Bioengineering, Indian Institute of Technology, Bombay, Powai, Mumbai-400076, India
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  • ORCID record for Santanu K. Ghosh
  • For correspondence: santanughosh@iitb.ac.in jayaram@austin.utexas.edu
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Abstract

Equipartitioning by chromosome hitchhiking and copy number correction by DNA amplification are at the heart of the evolutionary success of the selfish yeast 2-micron plasmid. The present analysis reveals plasmid presence near centromeres and telomeres in mitotic cells, with a preference towards the latter. The observed correlation of plasmid missegregation with non-disjunction of rDNA and telomeres under Cdc14 inactivation, higher plasmid missegregation upon induced missegregation of chromosome XII but not chromosome III, requirement of condensin for plasmid stability and the interaction of the condensin subunit Brn1 with the plasmid partitioning system lend functional credence to condensed chromatin being favored for plasmid tethering. By homing to condensed/quiescent chromosome locales, and not over-perturbing genome homeostasis, the plasmid may minimize fitness conflicts with its host. Analogous persistence strategies may be utilized by other extrachromosomal selfish genomes, for example, episomes of mammalian viruses that also hitchhike on host chromosomes for their stable maintenance.

  • Abbreviations
    CEN
    Centromere
    TEL
    Telomere
    3-AT
    3-Amino-1,2,4-triazole
  • Copyright 
    The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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    Hitchhiking on condensed chromatin promotes plasmid persistence in yeast without perturbing chromosome function
    Hemant Kumar Prajapati, Deepanshu Kumar, Xian-Mei Yang, Chien-Hui Ma, Priyanka Mittal, Makkuni Jayaram, Santanu K. Ghosh
    bioRxiv 2020.06.08.139568; doi: https://doi.org/10.1101/2020.06.08.139568
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    Hitchhiking on condensed chromatin promotes plasmid persistence in yeast without perturbing chromosome function
    Hemant Kumar Prajapati, Deepanshu Kumar, Xian-Mei Yang, Chien-Hui Ma, Priyanka Mittal, Makkuni Jayaram, Santanu K. Ghosh
    bioRxiv 2020.06.08.139568; doi: https://doi.org/10.1101/2020.06.08.139568

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