Spectrum of genes for inherited hearing loss in the Israeli Jewish population, including the novel human deafness gene ATOH1
Abstract
Variants in more than 150 genes are responsible for inherited hearing loss, with different causal alleles in different populations. The Israeli Jewish population includes communities of diverse geographic origins, revealing a wide range of deafness-associated variants and enabling clinical characterization of the associated phenotypes. Our goal was to identify the genetic causes of inherited hearing loss in this population, and to determine relationships among genotype, phenotype, and ethnicity. Genomic DNA samples obtained from informative relatives of 88 multiplex families, all of self-identified Jewish ancestry, with either non-syndromic or syndromic hearing loss, were sequenced for known and candidate genes for hearing loss using the HEar-Seq gene panel. The genetic causes of hearing loss were identified for 60% of families sequenced. One gene was encountered for the first time in human hearing loss: ATOH1 (Atonal), a basic helix-loop-helix transcription factor responsible for autosomal dominant progressive hearing loss in a five-generation family. Our results demonstrate that genomic sequencing with a gene panel dedicated to hearing loss is effective for genetic diagnoses in a diverse population. Comprehensive sequencing enables well-informed genetic counseling and clinical management by medical geneticists, otolaryngologists, audiologists, and speech therapists. Comprehensive sequencing can also be integrated into newborn screening for deafness.
Competing Interest Statement
The authors have declared no competing interest.
Subject Area
- Biochemistry (13349)
- Bioengineering (10169)
- Bioinformatics (32519)
- Biophysics (16733)
- Cancer Biology (13817)
- Cell Biology (19633)
- Clinical Trials (138)
- Developmental Biology (10618)
- Ecology (15716)
- Epidemiology (2067)
- Evolutionary Biology (20019)
- Genetics (13215)
- Genomics (18345)
- Immunology (13453)
- Microbiology (31485)
- Molecular Biology (13116)
- Neuroscience (68629)
- Paleontology (508)
- Pathology (2127)
- Pharmacology and Toxicology (3668)
- Physiology (5723)
- Plant Biology (11764)
- Synthetic Biology (3301)
- Systems Biology (8025)
- Zoology (1812)