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Evolutionary transcriptomics implicates HAND2 in the origins of implantation and regulation of gestation length

View ORCID ProfileMirna Marinić, View ORCID ProfileKatelyn Mika, Sravanthi Chigurupati, View ORCID ProfileVincent J. Lynch
doi: https://doi.org/10.1101/2020.06.15.152868
Mirna Marinić
1Department of Human Genetics, University of Chicago, 920 E 58th Street, Chicago, IL, 60637, USA
2Department of Organismal Biology and Anatomy, University of Chicago, 1025 E 57th Street, Chicago, IL, 60637, USA
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Katelyn Mika
1Department of Human Genetics, University of Chicago, 920 E 58th Street, Chicago, IL, 60637, USA
2Department of Organismal Biology and Anatomy, University of Chicago, 1025 E 57th Street, Chicago, IL, 60637, USA
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Sravanthi Chigurupati
1Department of Human Genetics, University of Chicago, 920 E 58th Street, Chicago, IL, 60637, USA
3AbbVie, 1N Waukegan Rd, North Chicago, IL, 60064-6119
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Vincent J. Lynch
4Department of Biological Sciences, University at Buffalo, SUNY, 551 Cooke Hall, Buffalo, NY, 14260, USA
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  • For correspondence: vjlynch@buffalo.edu
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Abstract

The developmental origins and evolutionary histories of cell types, tissues and organ systems contribute to the ways in which their dysfunction leads to disease. In mammals for example, the nature and extent of maternal-fetal interactions, how those interactions develop, and their evolutionary history likely influence diseases of pregnancy such as infertility and preterm birth. Here we show genes that evolved to be expressed at the maternal-fetal interface in Eutherian (‘Placental’) mammals play essential roles in the evolution of pregnancy and are associated with immune system disorders and preterm birth. Among these genes is the transcription factor HAND2, which suppresses estrogen signaling, an innovation of Eutherians, thereby allowing blastocyst implantation. We found that HAND2 is dynamically expressed in the decidua throughout the menstrual cycle and pregnancy, gradually decreasing to reach a low at term. HAND2 regulates a small but distinct set of target genes in endometrial stromal fibroblasts including the cytokine IL15, which was also dynamically expressed throughout the menstrual cycle and gestation, and promoted the migration of natural killer cells and extravillous cytotrophoblasts. Remarkably, we found that the HAND2 promoter loops to a distal enhancer containing SNPs implicated in the regulation of gestation length and birth weight. Collectively, these data connect HAND2 expression at the maternal-fetal interface with the evolution of implantation and gestation length regulation, and preterm birth.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Revised and expanded discussion section.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted July 21, 2020.
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Evolutionary transcriptomics implicates HAND2 in the origins of implantation and regulation of gestation length
Mirna Marinić, Katelyn Mika, Sravanthi Chigurupati, Vincent J. Lynch
bioRxiv 2020.06.15.152868; doi: https://doi.org/10.1101/2020.06.15.152868
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Evolutionary transcriptomics implicates HAND2 in the origins of implantation and regulation of gestation length
Mirna Marinić, Katelyn Mika, Sravanthi Chigurupati, Vincent J. Lynch
bioRxiv 2020.06.15.152868; doi: https://doi.org/10.1101/2020.06.15.152868

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