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Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology

Alexandra D. Buffry, Sebastian Kittelmann, View ORCID ProfileAlistair P. McGregor
doi: https://doi.org/10.1101/2020.06.17.152918
Alexandra D. Buffry
1Department of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford, OX3 0BP, United Kingdom
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Sebastian Kittelmann
2Centre for Functional Genomics, Department of Biological and Medical Sciences, Faculty of Health and Life Sciences, Oxford Brookes University, Oxford, OX3 0BP, United Kingdom
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Alistair P. McGregor
3Department of Biosciences, Durham University, Durham, DH1 3LE, United Kingdom
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  • ORCID record for Alistair P. McGregor
  • For correspondence: alistair.mcgregor@durham.ac.uk
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Abstract

Hox genes are expressed during embryogenesis and determine the regional identity of animal bodies along the antero-posterior axis. However, they also function post-embryonically to sculpt fine-scale morphology. To better understand how Hox genes are integrated into post-embryonic gene regulatory networks, we further analysed the role and regulation of Ultrabithorax (Ubx) during leg development in Drosophila melanogaster. Ubx regulates several aspects of bristle and trichome patterning on the femurs of the second (T2) and third (T3) leg pairs. We found that repression of trichomes in the proximal posterior region of the T2 femur by Ubx is likely mediated by activation of the expression of microRNA-92a by this Hox protein. Furthermore, we identified a novel enhancer of Ubx that recapitulates the temporal and regional activity of this gene in T2 and T3 legs. We then used transcription factor binding motif analysis in regions of accessible chromatin in T2 leg cells to predict and functionally test transcription factors that may regulate the Ubx leg enhancer. We also tested the role of the Ubx co-factors Homothorax (Hth) and Extradenticle (Exd) in T2 and T3 femurs. We found several transcription factors that may act upstream or in concert with Ubx to modulate trichome patterning along the proximo-distal axis of developing femurs and that the repression of trichomes also requires Hth and Exd. Taken together our results provide insights into how Ubx is integrated into a postembryonic gene regulatory network to determine fine-scale leg morphology.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • This version of the manuscript has been revised to include further characterization of enhancer activity in T2 and T3 pupal legs, and analysis of transcription factors that may regulate Ubx during development of these appendages.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted November 11, 2022.
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Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology
Alexandra D. Buffry, Sebastian Kittelmann, Alistair P. McGregor
bioRxiv 2020.06.17.152918; doi: https://doi.org/10.1101/2020.06.17.152918
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Characterisation of the role and regulation of Ultrabithorax in sculpting fine-scale leg morphology
Alexandra D. Buffry, Sebastian Kittelmann, Alistair P. McGregor
bioRxiv 2020.06.17.152918; doi: https://doi.org/10.1101/2020.06.17.152918

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