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A meta-analysis of the inhibin network reveals prognostic value in multiple solid tumors

Eduardo Listik, Ben Horst, Alex Seok Choi, Nam. Y. Lee, Balázs Győrffy, View ORCID ProfileKarthikeyan Mythreye
doi: https://doi.org/10.1101/2020.06.25.171942
Eduardo Listik
1Department of Pathology, University of Alabama at Birmingham, Birmingham AL, USA, 35294
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Ben Horst
1Department of Pathology, University of Alabama at Birmingham, Birmingham AL, USA, 35294
2Department of Chemistry and Biochemistry, University of South Carolina, Columbia SC, USA, 29208
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Alex Seok Choi
1Department of Pathology, University of Alabama at Birmingham, Birmingham AL, USA, 35294
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Nam. Y. Lee
3Division of Pharmacology, Chemistry and Biochemistry, College of Medicine, University of Arizona, Tucson, AZ, 85721, USA
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Balázs Győrffy
4TTK Cancer Biomarker Research Group, Institute of Enzymology, and Semmelweis University Department of Bioinformatics and 2nd Department of Pediatrics, Budapest, Hungary
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Karthikeyan Mythreye
1Department of Pathology, University of Alabama at Birmingham, Birmingham AL, USA, 35294
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  • ORCID record for Karthikeyan Mythreye
  • For correspondence: mythreye@uab.edu
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ABSTRACT

Inhibins and activins are dimeric ligands belonging to the TGFβ superfamily with emergent roles in cancer. Inhibins contain an α-subunit (INHA) and a β-subunit (either INHBA or INHBB), while activins are mainly homodimers of either βA (INHBA) or βB (INHBB) subunits. Inhibins are biomarkers in a subset of cancers and utilize the coreceptors betaglycan (TGFBR3) and endoglin (ENG) for physiological or pathological outcomes. Given the array of prior reports on inhibin, activin and the coreceptors in cancer, this study aims to provide a comprehensive analysis, assessing their functional prognostic potential in cancer using a bioinformatics approach. We identify cancer cell lines and cancer types most dependent and impacted, which included p53 mutated breast and ovarian cancers and lung adenocarcinomas. Moreover, INHA itself was dependent on TGFBR3 and ENG in multiple cancer types. INHA, INHBA, TGFBR3, and ENG also predicted patients’ response to anthracycline and taxane therapy in luminal A breast cancers. We also obtained a gene signature model that could accurately classify 96.7% of the cases based on outcomes. Lastly, we cross-compared gene correlations revealing INHA dependency to TGFBR3 or ENG influencing different pathways themselves. These results suggest that inhibins are particularly important in a subset of cancers depending on the coreceptor TGFBR3 and ENG and are of substantial prognostic value, thereby warranting further investigation.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted June 27, 2020.
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A meta-analysis of the inhibin network reveals prognostic value in multiple solid tumors
Eduardo Listik, Ben Horst, Alex Seok Choi, Nam. Y. Lee, Balázs Győrffy, Karthikeyan Mythreye
bioRxiv 2020.06.25.171942; doi: https://doi.org/10.1101/2020.06.25.171942
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A meta-analysis of the inhibin network reveals prognostic value in multiple solid tumors
Eduardo Listik, Ben Horst, Alex Seok Choi, Nam. Y. Lee, Balázs Győrffy, Karthikeyan Mythreye
bioRxiv 2020.06.25.171942; doi: https://doi.org/10.1101/2020.06.25.171942

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