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Population Graph GNNs for Brain Age Prediction

View ORCID ProfileKamilė Stankevičiūtė, View ORCID ProfileTiago Azevedo, Alexander Campbell, Richard Bethlehem, Pietro Liò
doi: https://doi.org/10.1101/2020.06.26.172171
Kamilė Stankevičiūtė
1Department of Computer Science and Technology, University of Cambridge, United Kingdom
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  • For correspondence: ks830@cam.ac.uk
Tiago Azevedo
1Department of Computer Science and Technology, University of Cambridge, United Kingdom
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Alexander Campbell
1Department of Computer Science and Technology, University of Cambridge, United Kingdom
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Richard Bethlehem
2Department of Psychiatry, University of Cambridge, United Kingdom
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Pietro Liò
1Department of Computer Science and Technology, University of Cambridge, United Kingdom
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Abstract

Many common neurological and neurodegenerative disorders, such as Alzheimer’s disease, dementia and multiple sclerosis, have been associated with abnormal patterns of apparent ageing of the brain. Discrepancies between the estimated brain age and the actual chronological age (brain age gaps) can be used to understand the biological pathways behind the ageing process, assess an individual’s risk for various brain disorders and identify new personalised treatment strategies. By flexibly integrating minimally preprocessed neuroimaging and non-imaging modalities into a population graph data structure, we train two types of graph neural network (GNN) architectures to predict brain age in a clinically relevant fashion as well as investigate their robustness to noisy inputs and graph sparsity. The multimodal population graph approach has the potential to learn from the entire cohort of healthy and affected subjects of both sexes at once, capturing a wide range of confounding effects and detecting variations in brain age trends between different sub-populations of subjects.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • Added acknowledgements.

  • https://github.com/kamilest/brain-age-gnn

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted July 04, 2020.
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Population Graph GNNs for Brain Age Prediction
Kamilė Stankevičiūtė, Tiago Azevedo, Alexander Campbell, Richard Bethlehem, Pietro Liò
bioRxiv 2020.06.26.172171; doi: https://doi.org/10.1101/2020.06.26.172171
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Population Graph GNNs for Brain Age Prediction
Kamilė Stankevičiūtė, Tiago Azevedo, Alexander Campbell, Richard Bethlehem, Pietro Liò
bioRxiv 2020.06.26.172171; doi: https://doi.org/10.1101/2020.06.26.172171

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