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Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in wildtype and cloche/npas4l mutant zebrafish embryos
View ORCID ProfileAlison C. McGarvey, View ORCID ProfileWolfgang Kopp, View ORCID ProfileDubravka Vučićević, View ORCID ProfileRieke Kempfer, View ORCID ProfileKenny Mattonet, Antje Hirsekorn, View ORCID ProfileIlija Bilić, Alexandra Trinks, View ORCID ProfileAnne Margarete Merks, View ORCID ProfileDaniela Panáková, View ORCID ProfileAna Pombo, View ORCID ProfileAltuna Akalin, View ORCID ProfileJan Philipp Junker, View ORCID ProfileDidier Y.R. Stainier, View ORCID ProfileDavid Garfield, View ORCID ProfileUwe Ohler, View ORCID ProfileScott Allen Lacadie
doi: https://doi.org/10.1101/2020.06.26.173377
Alison C. McGarvey
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
2Quantitative Developmental Biology, Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany
Wolfgang Kopp
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
3Bioinformatics and Omics Data Science Platform, Berlin Institute for Medical Systems Biology, Max Delbrück Centre for Molecular Medicine, Berlin, Germany
Dubravka Vučićević
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
Rieke Kempfer
4Epigenetic Regulation and Chromatin Architecture, Berlin Institute for Medical Systems Biology, Max Delbrück Centre for Molecular Medicine, Berlin, Germany; Institute for Biology, Humboldt Universität Berlin, Berlin, Germany
Kenny Mattonet
5Department of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany
Antje Hirsekorn
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
Ilija Bilić
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
Alexandra Trinks
6IRI Life Sciences, Humboldt Universität Berlin, Berlin, Germany
Anne Margarete Merks
7Electrochemical Signaling in Development and Disease, Max Delbrück Centre for Molecular Medicine, Berlin, Germany; DZHK (German Centre for Cardiovascular Research), partner site Berlin, Berlin, Germany
Daniela Panáková
7Electrochemical Signaling in Development and Disease, Max Delbrück Centre for Molecular Medicine, Berlin, Germany; DZHK (German Centre for Cardiovascular Research), partner site Berlin, Berlin, Germany
Ana Pombo
4Epigenetic Regulation and Chromatin Architecture, Berlin Institute for Medical Systems Biology, Max Delbrück Centre for Molecular Medicine, Berlin, Germany; Institute for Biology, Humboldt Universität Berlin, Berlin, Germany
Altuna Akalin
3Bioinformatics and Omics Data Science Platform, Berlin Institute for Medical Systems Biology, Max Delbrück Centre for Molecular Medicine, Berlin, Germany
Jan Philipp Junker
2Quantitative Developmental Biology, Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine, Berlin, Germany
Didier Y.R. Stainier
5Department of Developmental Genetics, Max Planck Institute for Heart and Lung Research, Bad Nauheim, Germany
David Garfield
8Bayer Pharma AG, Berlin, Germany
Uwe Ohler
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
9Department of Biology, Humboldt Universität Berlin, Berlin, Germany
Scott Allen Lacadie
1Computational Regulatory Genomics, Berlin Institute for Medical Systems Biology (BIMSB), Max Delbrück Center for Molecular Medicine, Berlin, Germany
10Berlin Institute of Health, Berlin, Germany
Posted June 26, 2020.
Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in wildtype and cloche/npas4l mutant zebrafish embryos
Alison C. McGarvey, Wolfgang Kopp, Dubravka Vučićević, Rieke Kempfer, Kenny Mattonet, Antje Hirsekorn, Ilija Bilić, Alexandra Trinks, Anne Margarete Merks, Daniela Panáková, Ana Pombo, Altuna Akalin, Jan Philipp Junker, Didier Y.R. Stainier, David Garfield, Uwe Ohler, Scott Allen Lacadie
bioRxiv 2020.06.26.173377; doi: https://doi.org/10.1101/2020.06.26.173377
Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in wildtype and cloche/npas4l mutant zebrafish embryos
Alison C. McGarvey, Wolfgang Kopp, Dubravka Vučićević, Rieke Kempfer, Kenny Mattonet, Antje Hirsekorn, Ilija Bilić, Alexandra Trinks, Anne Margarete Merks, Daniela Panáková, Ana Pombo, Altuna Akalin, Jan Philipp Junker, Didier Y.R. Stainier, David Garfield, Uwe Ohler, Scott Allen Lacadie
bioRxiv 2020.06.26.173377; doi: https://doi.org/10.1101/2020.06.26.173377
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