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Whole-Genome Sequences of the Severe Acute Respiratory Syndrome Coronavirus-2 obtained from Romanian patients between March and June of 2020

View ORCID ProfileMihaela Lazar, Odette Popovici, Barbara Mühlemann, Tim Durfee, View ORCID ProfileRazvan Stan
doi: https://doi.org/10.1101/2020.06.28.175802
Mihaela Lazar
1Cantacuzino Military-Medical Research and Development National Institute Bucharest, Romania
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  • For correspondence: lazar.mihaela@cantacuzino.ro
Odette Popovici
2Romanian National Institute Of Public Health, Bucharest, Romania
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Barbara Mühlemann
3Institute of Virology, Charité - Universitätsmedizin Berlin
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Tim Durfee
4DNASTAR Inc, USA
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Razvan Stan
1Cantacuzino Military-Medical Research and Development National Institute Bucharest, Romania
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Abstract

Impact of mutations on the evolution of Severe Acute Respiratory Syndrome Coronavirus-2 (SARS-CoV-2) are needed for ongoing global efforts to track and trace the current pandemic, in order to enact effective prevention and treatment options. SARS-Co-V-2 viral genomes were detected and sequenced from 18 Romanian patients suffering from coronavirus disease-2019. Viral Spike S glycoprotein sequences were used to generate model structures and assess the role of mutations on protein stability. We integrated the phylogenetic tree within the available European SARS-Co-V-2 genomic sequences. We further provide an epidemiological overview of the pre-existing conditions that are lethal in relevant Romanian patients. Non-synonymous mutations in the viral Spike glycoprotein relating to infectivity are constructed in models of protein structures. Continuing search to limit and treat SARS-CoV-2 benefit from our contribution in delineating the viral Spike glycoprotein mutations, as well as from assessment of their role on protein stability or complex formation with human receptor angiotensin-converting enzyme 2. Our results help implement and extend worldwide genomic surveillance of coronavirus disease-2019.

Competing Interest Statement

Tim Durfee is an employee of DNASTAR, Inc.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted July 07, 2020.
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Whole-Genome Sequences of the Severe Acute Respiratory Syndrome Coronavirus-2 obtained from Romanian patients between March and June of 2020
Mihaela Lazar, Odette Popovici, Barbara Mühlemann, Tim Durfee, Razvan Stan
bioRxiv 2020.06.28.175802; doi: https://doi.org/10.1101/2020.06.28.175802
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Whole-Genome Sequences of the Severe Acute Respiratory Syndrome Coronavirus-2 obtained from Romanian patients between March and June of 2020
Mihaela Lazar, Odette Popovici, Barbara Mühlemann, Tim Durfee, Razvan Stan
bioRxiv 2020.06.28.175802; doi: https://doi.org/10.1101/2020.06.28.175802

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