PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

Elliot A. Hershberg; Jennie L. Close; Conor K. Camplisson; Sahar Attar; Ryan Chern; Yuzhen Liu; Shreeram Akilesh; Philip R. Nicovich; Brian J. Beliveau

doi:10.1101/2020.07.05.188797

New Results

PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

View ORCID ProfileElliot A. Hershberg, Jennie L. Close, View ORCID ProfileConor K. Camplisson, View ORCID ProfileSahar Attar, View ORCID ProfileRyan Chern, View ORCID ProfileYuzhen Liu, View ORCID ProfileShreeram Akilesh, View ORCID ProfilePhilip R. Nicovich, View ORCID ProfileBrian J. Beliveau

doi: https://doi.org/10.1101/2020.07.05.188797

Elliot A. Hershberg

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Elliot A. Hershberg

Jennie L. Close

2Allen Institute for Brain Science, Seattle, WA, 98109

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Conor K. Camplisson

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Conor K. Camplisson

Sahar Attar

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

3Department of Pathology, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Sahar Attar

Ryan Chern

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Ryan Chern

Yuzhen Liu

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

4Molecular and Cellular Biology Program, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Yuzhen Liu

Shreeram Akilesh

3Department of Pathology, University of Washington, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Shreeram Akilesh

Philip R. Nicovich

2Allen Institute for Brain Science, Seattle, WA, 98109

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Philip R. Nicovich

Brian J. Beliveau

1Department of Genome Sciences, University of Washington, Seattle, WA, 98195

5Brotman Baty Institute for Precision Medicine, Seattle, WA, 98195

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
ORCID record for Brian J. Beliveau
For correspondence: [email protected]

Abstract
Full Text
Info/History
Metrics
Supplementary material
Data/Code
Preview PDF

Supplementary Information[supplements/188797_file02.pdf]

View the discussion thread.

PreviousNext

Posted July 06, 2020.

Download PDF

Supplementary Material

Data/Code

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

Elliot A. Hershberg, Jennie L. Close, Conor K. Camplisson, Sahar Attar, Ryan Chern, Yuzhen Liu, Shreeram Akilesh, Philip R. Nicovich, Brian J. Beliveau

bioRxiv 2020.07.05.188797; doi: https://doi.org/10.1101/2020.07.05.188797

Share This Article:

Citation Tools

PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

Elliot A. Hershberg, Jennie L. Close, Conor K. Camplisson, Sahar Attar, Ryan Chern, Yuzhen Liu, Shreeram Akilesh, Philip R. Nicovich, Brian J. Beliveau

bioRxiv 2020.07.05.188797; doi: https://doi.org/10.1101/2020.07.05.188797

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Genomics

Subject Areas

All Articles

Animal Behavior and Cognition (6022)
Biochemistry (13697)
Bioengineering (10429)
Bioinformatics (33141)
Biophysics (17097)
Cancer Biology (14169)
Cell Biology (20098)
Clinical Trials (138)
Developmental Biology (10866)
Ecology (16008)
Epidemiology (2067)
Evolutionary Biology (20334)
Genetics (13392)
Genomics (18629)
Immunology (13741)
Microbiology (32149)
Molecular Biology (13380)
Neuroscience (70031)
Paleontology (526)
Pathology (2188)
Pharmacology and Toxicology (3741)
Physiology (5860)
Plant Biology (12020)
Scientific Communication and Education (1814)
Synthetic Biology (3365)
Systems Biology (8163)
Zoology (1841)