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SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments
View ORCID ProfileDavid J. Edwards, View ORCID ProfileSebastián Duchêne, View ORCID ProfileBernard Pope, View ORCID ProfileKathryn E. Holt
doi: https://doi.org/10.1101/2020.07.08.194480
David J. Edwards
1Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia
Sebastián Duchêne
2Department of Microbiology and Immunology, Peter Doherty Institute for Infection and Immunity, The University of Melbourne, 792 Elizabeth Street, Melbourne, Victoria, 3000, Australia
Bernard Pope
3Melbourne Bioinformatics, The University of Melbourne, 187 Grattan Street, Carlton, Victoria 3053, Australia
4Department of Clinical Pathology, The University of Melbourne, Victorian Comprehensive Cancer Centre, 305 Grattan Street, Melbourne, Victoria 3000, Australia
5Department of Medicine, Central Clinical School, Monash University, Clayton, Victoria 3800, Australia
6Department of Surgery (Royal Melbourne Hospital), Melbourne Medical School, Faculty of Medicine, Dentistry and Health Sciences, The University of Melbourne, Australia
Kathryn E. Holt
1Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Victoria 3004, Australia
7London School of Hygiene & Tropical Medicine, London WC1E 7HT, UK
Posted July 10, 2020.
SNPPar: identifying convergent evolution and other homoplasies from microbial whole-genome alignments
David J. Edwards, Sebastián Duchêne, Bernard Pope, Kathryn E. Holt
bioRxiv 2020.07.08.194480; doi: https://doi.org/10.1101/2020.07.08.194480
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