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Movements of ancient human endogenous retroviruses detected in SOX2-expressing cells

Kazuaki Monde, Yorifumi Satou, Mizuki Goto, Yoshikazu Uchiyama, View ORCID ProfileJumpei Ito, Taku Kaitsuka, Hiromi Terasawa, Shinya Yamaga, Tomoya Matsusako, Fan-Yan Wei, Ituro Inoue, Kazuhito Tomizawa, Akira Ono, Takumi Era, Tomohiro Sawa, Yosuke Maeda
doi: https://doi.org/10.1101/2020.07.14.202135
Kazuaki Monde
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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  • For correspondence: monde@kumamoto-u.ac.jp
Yorifumi Satou
bJoint Research Center for Human Retrovirus Infection, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Mizuki Goto
eDepartment of Cell Modulation, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Chuo-ku, 860-0811, Kumamoto, Japan
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Yoshikazu Uchiyama
cDepartment of Medical Physics, Kumamoto University, Chuo-ku, 862-0976, Kumamoto, Japan
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Jumpei Ito
fNational Institute of Genetics Laboratory of Human Genetics, Mishima, 411-8540, Shizuoka, Japan
gDivision of Systems Virology, Department of infectious Disease Control, International Research Center for infectious Diseases, Institute of Medical Science, The University of Tokyo, 108-8639, Tokyo, Japan
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  • ORCID record for Jumpei Ito
Taku Kaitsuka
dDepartment of Molecular Physiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Hiromi Terasawa
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Shinya Yamaga
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Tomoya Matsusako
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Fan-Yan Wei
dDepartment of Molecular Physiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Ituro Inoue
fNational Institute of Genetics Laboratory of Human Genetics, Mishima, 411-8540, Shizuoka, Japan
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Kazuhito Tomizawa
dDepartment of Molecular Physiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Akira Ono
hDepartment of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, Michigan, 48109, United States of America
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Takumi Era
eDepartment of Cell Modulation, Institute of Molecular Embryology and Genetics (IMEG), Kumamoto University, Chuo-ku, 860-0811, Kumamoto, Japan
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Tomohiro Sawa
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Yosuke Maeda
aDepartment of Microbiology, Faculty of Life Sciences, Kumamoto University, Chuo-ku, 860-8556, Kumamoto, Japan
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Summary

Human endogenous retroviruses (HERVs) occupy approximately 8% of human genome. HERVs, which are transcribed in early embryos, are epigenetically silenced in somatic cells, except in pathological contexts. HERV-K is thought to protect the embryo from exogenous viral infection. However, uncontrollable HERV-K expression in somatic cells has been implicated in several diseases. Here, we show that SOX2, which plays a key role in maintaining pluripotency of stem cells, is critical for the transcription of HERV-K LTR5Hs. HERV-K can undergo retrotransposition within producer cells in the absence of Env expression. Furthermore, new HERV-K integration sites were identified in a long-term culture of induced pluripotent stem cells, which express SOX2. Together, these results suggest the possibility that the strict dependence of HERV-K on SOX2 have allowed contribution of HERV-K to the protection of early embryos during evolution while limiting potentially harmful effects of HERV-K retrotransposition on host genome integrity to these early embryos.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted July 14, 2020.
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Movements of ancient human endogenous retroviruses detected in SOX2-expressing cells
Kazuaki Monde, Yorifumi Satou, Mizuki Goto, Yoshikazu Uchiyama, Jumpei Ito, Taku Kaitsuka, Hiromi Terasawa, Shinya Yamaga, Tomoya Matsusako, Fan-Yan Wei, Ituro Inoue, Kazuhito Tomizawa, Akira Ono, Takumi Era, Tomohiro Sawa, Yosuke Maeda
bioRxiv 2020.07.14.202135; doi: https://doi.org/10.1101/2020.07.14.202135
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Movements of ancient human endogenous retroviruses detected in SOX2-expressing cells
Kazuaki Monde, Yorifumi Satou, Mizuki Goto, Yoshikazu Uchiyama, Jumpei Ito, Taku Kaitsuka, Hiromi Terasawa, Shinya Yamaga, Tomoya Matsusako, Fan-Yan Wei, Ituro Inoue, Kazuhito Tomizawa, Akira Ono, Takumi Era, Tomohiro Sawa, Yosuke Maeda
bioRxiv 2020.07.14.202135; doi: https://doi.org/10.1101/2020.07.14.202135

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