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EEG-Beats: Automated analysis of heart rate variability (HVR) from EEG-EKG

Supakjeera Thanapaisal, Sabrina Mosher, Brenda Trejo, View ORCID ProfileKay Robbins
doi: https://doi.org/10.1101/2020.07.21.211862
Supakjeera Thanapaisal
Department of Computer Science, University of Texas at San Antonio, San Antonio, TX, USA
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Sabrina Mosher
Department of Computer Science, University of Texas at San Antonio, San Antonio, TX, USA
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Brenda Trejo
Department of Computer Science, University of Texas at San Antonio, San Antonio, TX, USA
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Kay Robbins
Department of Computer Science, University of Texas at San Antonio, San Antonio, TX, USA
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  • ORCID record for Kay Robbins
  • For correspondence: kay.robbins@utsa.edu
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Abstract

Heart rate variability (HRV), the variation of the period between consecutive heartbeats, is an established tool for assessing physiological indicators such as stress and fatigue. In non-clinical settings, HRV is often computed from signals acquired using wearable devices that are susceptible to strong artifacts. In EEG (electroencephalography) experiments, these devices must be synchronized with the EEG and typically provide intermittent interbeat interval information based on proprietary artifact-removal algorithms. This paper describes an automated algorithm that uses the output of an EEG sensor mounted on a subject’s chest to accurately detect interbeat intervals and to calculate time-varying metrics. The algorithm is designed for raw signals and is robust to artifacts, resulting in fine-grained capture of HRV that is synchronized with the EEG. An open-source MATLAB toolbox (EEG-Beats) is available to calculate interbeat intervals and many standard HRV time and frequency indicators. EEG-Beats is designed to run in a completely automated fashion on an entire study without manual intervention. The paper applies EEG-Beats to EKG signals measured with an EEG sensor in a large longitudinal study (17 subjects, 6 tasks, 854 datasets). The toolbox is available at https://github.com/VisLab/EEG-Beats.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://github.com/VisLab/EEG-Beats

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.
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Posted July 22, 2020.
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EEG-Beats: Automated analysis of heart rate variability (HVR) from EEG-EKG
Supakjeera Thanapaisal, Sabrina Mosher, Brenda Trejo, Kay Robbins
bioRxiv 2020.07.21.211862; doi: https://doi.org/10.1101/2020.07.21.211862
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EEG-Beats: Automated analysis of heart rate variability (HVR) from EEG-EKG
Supakjeera Thanapaisal, Sabrina Mosher, Brenda Trejo, Kay Robbins
bioRxiv 2020.07.21.211862; doi: https://doi.org/10.1101/2020.07.21.211862

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