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A CRISPR/Cas9 vector system for neutrophil-specific gene disruption in zebrafish

Yueyang Wang, Alan Y. Hsu, Eric M. Walton, Ramizah Syahirah, Tianqi Wang, Wenqing Zhou, Chang Ding, Abby Pei Lemke, View ORCID ProfileDavid M. Tobin, View ORCID ProfileQing Deng
doi: https://doi.org/10.1101/2020.07.27.223008
Yueyang Wang
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Alan Y. Hsu
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Eric M. Walton
2Departments of Molecular Genetics and Microbiology, and Immunology, Duke University School of Medicine, Durham, NC 27710 USA
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Ramizah Syahirah
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Tianqi Wang
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Wenqing Zhou
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Chang Ding
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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Abby Pei Lemke
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
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David M. Tobin
2Departments of Molecular Genetics and Microbiology, and Immunology, Duke University School of Medicine, Durham, NC 27710 USA
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  • ORCID record for David M. Tobin
Qing Deng
1Department of Biological Sciences, Purdue University, West Lafayette, IN 47907 USA
3Purdue Institute for Inflammation, Immunology, & Infectious Disease, Purdue University, West Lafayette, IN 47907 USA
4Purdue University Center for Cancer Research, Purdue University, West Lafayette, IN 47907 USA
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  • ORCID record for Qing Deng
  • For correspondence: deng67@purdue.edu
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Abstract

Tissue-specific knockout techniques are widely applied in biological studies to probe the tissue-specific roles of specific genes in physiology, development, and disease. CRISPR/Cas9 is a widely used technology to perform fast and efficient genome editing in vitro and in vivo. Here, we report a robust CRISPR-based gateway system for tissue-specific gene inactivation in zebrafish. A transgenic fish line expressing Cas9 under the control of a neutrophil-restricted promoter was constructed. As proof of principle, we transiently disrupted rac2 or cdk2 in neutrophils using plasmids driving the expression of sgRNAs from U6 promoters. Loss of the rac2 or cdk2 gene in neutrophils resulted in significantly decreased cell motility, which could be restored by re-expressing Rac2 or Cdk2 in neutrophils in the corresponding knockout background. The subcellular location of Rac activation and actin structure and stress in the context of neutrophil migration was determined in both the wild-type and rac2 knockout neutrophils in vivo. In addition, we evaluated an alternative approach where the Cas9 protein is ubiquitously expressed while the sgRNA is processed by ribozymes and expressed in a neutrophil-restricted manner. Cell motility was also reduced upon rac2 sgRNA expression. Together, our work provides a potent tool that can be used to advance the utility of zebrafish in identification and characterization of gene functions in neutrophils.

Competing Interest Statement

The authors have declared no competing interest.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted July 28, 2020.
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A CRISPR/Cas9 vector system for neutrophil-specific gene disruption in zebrafish
Yueyang Wang, Alan Y. Hsu, Eric M. Walton, Ramizah Syahirah, Tianqi Wang, Wenqing Zhou, Chang Ding, Abby Pei Lemke, David M. Tobin, Qing Deng
bioRxiv 2020.07.27.223008; doi: https://doi.org/10.1101/2020.07.27.223008
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A CRISPR/Cas9 vector system for neutrophil-specific gene disruption in zebrafish
Yueyang Wang, Alan Y. Hsu, Eric M. Walton, Ramizah Syahirah, Tianqi Wang, Wenqing Zhou, Chang Ding, Abby Pei Lemke, David M. Tobin, Qing Deng
bioRxiv 2020.07.27.223008; doi: https://doi.org/10.1101/2020.07.27.223008

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