Article Information
History
- July 30, 2020.
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
Author Information
- Caroline Weis1,2,*,
- Aline Cuénod3,4,
- Bastian Rieck1,2,
- Felipe Llinares-López1,2,
- Olivier Dubuis8,
- Susanne Graf7,
- Claudia Lang8,
- Michael Oberle9,
- Kirstine K. Soegaard3,4,
- Michael Osthoff5,6,
- Karsten Borgwardt1,2,*,+ and
- Adrian Egli3,4,*,+
- 1Department of Biosystems and Engineering, ETH Zürich, Basel, Switzerland
- 2SIB Swiss Institute of Bioinformatics, Switzerland
- 3Applied Microbiology Research, Department of Biomedicine, University of Basel, Basel, Switzerland
- 4Division of Clinical Bacteriology and Mycology, University Hospital Basel, Basel, Switzerland
- 5Division of Infectious Diseases and Hospital Epidemiology, University Hospital and University of Basel, Basel, Switzerland
- 6Department of Internal Medicine, University Hospital and University of Basel, Basel, Switzerland
- 7Department for Microbiology, Cantonal Hospital Baselland, Liestal, Switzerland
- 8Clinical Microbiology, Viollier AG, Allschwil, Switzerland
- 9Institute for Laboratory Medicine, Medical Microbiology, Cantonal Hospital of Aarau, Aarau, Switzerland
- ↵*corresponding: Caroline Weis, Machine Learning and Computational Biology Lab, Mattenstrasse 26, 4058 Basel, Switzerland, Email: caroline.weis{at}bsse.ethz.ch, Phone: +41 61 387 34 39, Prof. Dr. Karsten Borgwardt, Machine Learning and Computational Biology Lab, Mattenstrasse 26, 4058 Basel, Switzerland, Email: karsten.borgwardt{at}bsse.ethz.ch, Phone: +41 61 387 34 20, Prof. Dr. Dr. Adrian Egli, MD PhD, Clinical Bacteriology and Mycology, University Hospital Basel, Petersgraben 4, 4031 Basel, Switzerland, Email: adrian.egli{at}usb.ch, Phone: +41 61 556 57 49
↵+ equally contributed