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3D quantification of zebrafish cerebrovascular architecture by automated image analysis of light sheet fluorescence microscopy datasets
View ORCID ProfileE. C. Kugler, J. Frost, V. Silva, K. Plant, K. Chhabria, View ORCID ProfileT. J.A. Chico, P. A. Armitage
doi: https://doi.org/10.1101/2020.08.06.239905
E. C. Kugler
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
2The Bateson Centre, Firth Court, University of Sheffield, Western Bank, Sheffield, S10 2TN United Kingdom
3Insigneo Institute for in silico Medicine, The Pam Liversidge Building, Sheffield, S1 3JD United Kingdom
J. Frost
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
4Hull York Medical School, John Hughlings Jackson Building, University Road, University of York, Heslington, York, YO10 5DD
V. Silva
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
K. Plant
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
2The Bateson Centre, Firth Court, University of Sheffield, Western Bank, Sheffield, S10 2TN United Kingdom
2The Bateson Centre, Firth Court, University of Sheffield, Western Bank, Sheffield, S10 2TN United Kingdom
K. Chhabria
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
2The Bateson Centre, Firth Court, University of Sheffield, Western Bank, Sheffield, S10 2TN United Kingdom
T. J.A. Chico
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
2The Bateson Centre, Firth Court, University of Sheffield, Western Bank, Sheffield, S10 2TN United Kingdom
3Insigneo Institute for in silico Medicine, The Pam Liversidge Building, Sheffield, S1 3JD United Kingdom
P. A. Armitage
1Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Medical School, Beech Hill Road, Sheffield, S10 2RX United Kingdom
3Insigneo Institute for in silico Medicine, The Pam Liversidge Building, Sheffield, S1 3JD United Kingdom

Article usage
Posted August 06, 2020.
3D quantification of zebrafish cerebrovascular architecture by automated image analysis of light sheet fluorescence microscopy datasets
E. C. Kugler, J. Frost, V. Silva, K. Plant, K. Chhabria, T. J.A. Chico, P. A. Armitage
bioRxiv 2020.08.06.239905; doi: https://doi.org/10.1101/2020.08.06.239905
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