New Results
High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next generation sequencing
View ORCID ProfileRahul C. Bhoyar, View ORCID ProfileAbhinav Jain, View ORCID ProfileParas Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, View ORCID ProfileSudhir Bhandari, Sandeep K Mathur, Anshul Kumar, Rahul Sahlot, Pallavali Rojarani, Juturu Vijaya Lakshmi, Araveti Surekha, Pulala Chandra Sekhar, Shelly Mahajan, View ORCID ProfileShet Masih, Pawan Singh, Vipin Kumar, Blessy Jose, Vidur Mahajan, Vivek Gupta, Rakesh Gupta, Prabhakar Arumugam, Anjali Singh, Ananya Nandy, P.V. Raghavendran, Rakesh Mohan Jha, Anupama Kumari, View ORCID ProfileSheetal Gandotra, Vivek Rao, View ORCID ProfileMohammed Faruq, Sanjeev Kumar, G Betsy Reshma, G Narendra Varma, Shuvra Shekhar Roy, Antara Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, Mukta Poojary, View ORCID ProfileVinod Scaria, View ORCID ProfileSridhar Sivasubbu
doi: https://doi.org/10.1101/2020.08.10.242677
Rahul C. Bhoyar
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Abhinav Jain
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Paras Sehgal
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Mohit Kumar Divakar
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Disha Sharma
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Mohamed Imran
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Bani Jolly
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Gyan Ranjan
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Mercy Rophina
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Sumit Sharma
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Sanjay Siwach
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Kavita Pandhare
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Swayamprabha Sahoo
3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
Maheswata Sahoo
3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
Ananya Nayak
3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
Jatindra Nath Mohanty
3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
Jayashankar Das
3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
Sudhir Bhandari
4Sawai Man Singh Medical College, Jaipur, Rajasthan 302004, India
Sandeep K Mathur
4Sawai Man Singh Medical College, Jaipur, Rajasthan 302004, India
Anshul Kumar
4Sawai Man Singh Medical College, Jaipur, Rajasthan 302004, India
Rahul Sahlot
4Sawai Man Singh Medical College, Jaipur, Rajasthan 302004, India
Pallavali Rojarani
5Kurnool Medical College, Kurnool, Andhra Pradesh 518002, India
Juturu Vijaya Lakshmi
5Kurnool Medical College, Kurnool, Andhra Pradesh 518002, India
Araveti Surekha
5Kurnool Medical College, Kurnool, Andhra Pradesh 518002, India
Pulala Chandra Sekhar
5Kurnool Medical College, Kurnool, Andhra Pradesh 518002, India
Shelly Mahajan
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Shet Masih
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Pawan Singh
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Vipin Kumar
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Blessy Jose
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Vidur Mahajan
6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
Vivek Gupta
7Government Institute of Medical Sciences, NOIDA, India
Rakesh Gupta
7Government Institute of Medical Sciences, NOIDA, India
Prabhakar Arumugam
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Anjali Singh
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Ananya Nandy
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
P.V. Raghavendran
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Rakesh Mohan Jha
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Anupama Kumari
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Sheetal Gandotra
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Vivek Rao
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Mohammed Faruq
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Sanjeev Kumar
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
G Betsy Reshma
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
G Narendra Varma
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Shuvra Shekhar Roy
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Antara Sengupta
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Sabyasachi Chattopadhyay
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Khushboo Singhal
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Shalini Pradhan
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
Diksha Jha
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Salwa Naushin
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Saruchi Wadhwa
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Nishu Tyagi
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Mukta Poojary
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Vinod Scaria
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Sridhar Sivasubbu
1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
Article Information
History
- August 10, 2020.
Copyright
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
Author Information
- Rahul C. Bhoyar1,
- Abhinav Jain1,2,
- Paras Sehgal1,2,
- Mohit Kumar Divakar1,2,
- Disha Sharma1,
- Mohamed Imran1,2,
- Bani Jolly1,2,
- Gyan Ranjan1,2,
- Mercy Rophina1,2,
- Sumit Sharma1,
- Sanjay Siwach1,
- Kavita Pandhare1,
- Swayamprabha Sahoo3,
- Maheswata Sahoo3,
- Ananya Nayak3,
- Jatindra Nath Mohanty3,
- Jayashankar Das3,
- Sudhir Bhandari4,
- Sandeep K Mathur4,
- Anshul Kumar4,
- Rahul Sahlot4,
- Pallavali Rojarani5,
- Juturu Vijaya Lakshmi5,
- Araveti Surekha5,
- Pulala Chandra Sekhar5,
- Shelly Mahajan6,
- Shet Masih6,
- Pawan Singh6,
- Vipin Kumar6,
- Blessy Jose6,
- Vidur Mahajan6,
- Vivek Gupta7,
- Rakesh Gupta7,
- Prabhakar Arumugam1,2,
- Anjali Singh1,2,
- Ananya Nandy1,2,
- P.V. Raghavendran1,2,
- Rakesh Mohan Jha1,2,
- Anupama Kumari1,2,
- Sheetal Gandotra1,2,
- Vivek Rao1,2,
- Mohammed Faruq1,2,
- Sanjeev Kumar1,2,
- G Betsy Reshma1,2,
- G Narendra Varma1,
- Shuvra Shekhar Roy1,2,
- Antara Sengupta1,2,
- Sabyasachi Chattopadhyay1,2,
- Khushboo Singhal1,2,
- Shalini Pradhan1,
- Diksha Jha1,2,
- Salwa Naushin1,2,
- Saruchi Wadhwa1,2,
- Nishu Tyagi1,2,
- Mukta Poojary1,2,
- Vinod Scaria1,2,* and
- Sridhar Sivasubbu1,2,*
- 1CSIR Institute of Genomics and Integrative Biology (CSIR-IGIB), Mathura Road, Delhi 110025, India
- 2Academy for Scientific and Innovative Research, Human Resource Development Centre Campus, Ghaziabad, Uttar Pradesh, India
- 3IMS and SUM Hospital, Siksha “O” Anusandhan (Deemed to be University), Kalinga Nagar, Bhubaneswar, Odisha 751003, India
- 4Sawai Man Singh Medical College, Jaipur, Rajasthan 302004, India
- 5Kurnool Medical College, Kurnool, Andhra Pradesh 518002, India
- 6Center for Advanced Research in Imaging, Neuroscience & Genomics, Ring Road, Defence Colony, Delhi, 110024, India
- 7Government Institute of Medical Sciences, NOIDA, India
- ↵*Corresponding authors Sridhar Sivasubbu- s.sivasubbu{at}igib.res.in, Vinod Scaria- vinods{at}igib.res.in
Posted August 10, 2020.
High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next generation sequencing
Rahul C. Bhoyar, Abhinav Jain, Paras Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, Sudhir Bhandari, Sandeep K Mathur, Anshul Kumar, Rahul Sahlot, Pallavali Rojarani, Juturu Vijaya Lakshmi, Araveti Surekha, Pulala Chandra Sekhar, Shelly Mahajan, Shet Masih, Pawan Singh, Vipin Kumar, Blessy Jose, Vidur Mahajan, Vivek Gupta, Rakesh Gupta, Prabhakar Arumugam, Anjali Singh, Ananya Nandy, P.V. Raghavendran, Rakesh Mohan Jha, Anupama Kumari, Sheetal Gandotra, Vivek Rao, Mohammed Faruq, Sanjeev Kumar, G Betsy Reshma, G Narendra Varma, Shuvra Shekhar Roy, Antara Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, Mukta Poojary, Vinod Scaria, Sridhar Sivasubbu
bioRxiv 2020.08.10.242677; doi: https://doi.org/10.1101/2020.08.10.242677
High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next generation sequencing
Rahul C. Bhoyar, Abhinav Jain, Paras Sehgal, Mohit Kumar Divakar, Disha Sharma, Mohamed Imran, Bani Jolly, Gyan Ranjan, Mercy Rophina, Sumit Sharma, Sanjay Siwach, Kavita Pandhare, Swayamprabha Sahoo, Maheswata Sahoo, Ananya Nayak, Jatindra Nath Mohanty, Jayashankar Das, Sudhir Bhandari, Sandeep K Mathur, Anshul Kumar, Rahul Sahlot, Pallavali Rojarani, Juturu Vijaya Lakshmi, Araveti Surekha, Pulala Chandra Sekhar, Shelly Mahajan, Shet Masih, Pawan Singh, Vipin Kumar, Blessy Jose, Vidur Mahajan, Vivek Gupta, Rakesh Gupta, Prabhakar Arumugam, Anjali Singh, Ananya Nandy, P.V. Raghavendran, Rakesh Mohan Jha, Anupama Kumari, Sheetal Gandotra, Vivek Rao, Mohammed Faruq, Sanjeev Kumar, G Betsy Reshma, G Narendra Varma, Shuvra Shekhar Roy, Antara Sengupta, Sabyasachi Chattopadhyay, Khushboo Singhal, Shalini Pradhan, Diksha Jha, Salwa Naushin, Saruchi Wadhwa, Nishu Tyagi, Mukta Poojary, Vinod Scaria, Sridhar Sivasubbu
bioRxiv 2020.08.10.242677; doi: https://doi.org/10.1101/2020.08.10.242677
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