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Molecular architecture of the endocytic TPLATE complex

View ORCID ProfileKlaas Yperman, View ORCID ProfileJie Wang, View ORCID ProfileDominique Eeckhout, View ORCID ProfileJoanna Winkler, View ORCID ProfileLam Dai Vu, Michael Vandorpe, View ORCID ProfilePeter Grones, View ORCID ProfileEvelien Mylle, View ORCID ProfileMichael Kraus, Romain Merceron, View ORCID ProfileJonah Nolf, View ORCID ProfileEliana Mor, View ORCID ProfilePieter De Bruyn, View ORCID ProfileRemy Loris, View ORCID ProfileMartin Potocký, Savvas N. Savvides, View ORCID ProfileBert De Rybel, View ORCID ProfileGeert De Jaeger, View ORCID ProfileDaniël Van Damme, Roman Pleskot
doi: https://doi.org/10.1101/2020.08.13.249276
Klaas Yperman
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Jie Wang
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Dominique Eeckhout
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Joanna Winkler
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Lam Dai Vu
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Michael Vandorpe
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Peter Grones
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Evelien Mylle
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Michael Kraus
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Romain Merceron
4Department of Biochemistry and Microbiology, Ghent University, 9052 Ghent, Belgium
5VIB Center for Inflammation Research, 9052 Ghent, Belgium
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Jonah Nolf
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Eliana Mor
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Pieter De Bruyn
6Vrije Universiteit Brussel, Structural Biology Brussels, Department of Biotechnology, 1050 Brussels, Belgium
7VIB-VUB Center for Structural Biology, Structural Biology Research Center, Molecular Recognition Unit, 1050 Brussels, Belgium
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Remy Loris
6Vrije Universiteit Brussel, Structural Biology Brussels, Department of Biotechnology, 1050 Brussels, Belgium
7VIB-VUB Center for Structural Biology, Structural Biology Research Center, Molecular Recognition Unit, 1050 Brussels, Belgium
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Martin Potocký
8Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 16502 Prague 6, Czech Republic
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Savvas N. Savvides
4Department of Biochemistry and Microbiology, Ghent University, 9052 Ghent, Belgium
5VIB Center for Inflammation Research, 9052 Ghent, Belgium
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Bert De Rybel
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Geert De Jaeger
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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Daniël Van Damme
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
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  • For correspondence: daniel.vandamme@psb.vib-ugent.be pleskot@ueb.cas.cz
Roman Pleskot
1Ghent University, Department of Plant Biotechnology and Bioinformatics, Technologiepark 71, 9052 Ghent, Belgium
2VIB Center for Plant Systems Biology, Technologiepark 71, 9052 Ghent, Belgium
8Institute of Experimental Botany, Academy of Sciences of the Czech Republic, Rozvojová 263, 16502 Prague 6, Czech Republic
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  • For correspondence: daniel.vandamme@psb.vib-ugent.be pleskot@ueb.cas.cz
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Abstract

Eukaryotic cells rely on endocytosis to regulate their plasma membrane proteome and lipidome. Most eukaryotic groups, except fungi and animals, have retained the evolutionary ancient TSET complex as endocytic regulator. Unlike other coatomer complexes, structural insight into TSET is lacking. Here, we reveal the molecular architecture of plant TSET (TPLATE complex/TPC) using an integrative structural approach. We identify crucial roles for specific TSET subunits in complex assembly and membrane interaction. Our data therefore generates novel insight into the differences between the hexameric TSET in Dictyostelium and the octameric TPC in plants. Structural elucidation of this ancient adaptor complex represents the missing piece in the coatomer-puzzle and vastly advances our functional as well as evolutionary insight into the process of endocytosis.

One Sentence Summary An integrative structural approach reveals crucial roles of specific subunits in the plant TPLATE/TSET complex.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • ↵‡ Lead contact

  • This is the updated version of the paper which is now accepted at Science Advances.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted January 13, 2021.
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Molecular architecture of the endocytic TPLATE complex
Klaas Yperman, Jie Wang, Dominique Eeckhout, Joanna Winkler, Lam Dai Vu, Michael Vandorpe, Peter Grones, Evelien Mylle, Michael Kraus, Romain Merceron, Jonah Nolf, Eliana Mor, Pieter De Bruyn, Remy Loris, Martin Potocký, Savvas N. Savvides, Bert De Rybel, Geert De Jaeger, Daniël Van Damme, Roman Pleskot
bioRxiv 2020.08.13.249276; doi: https://doi.org/10.1101/2020.08.13.249276
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Molecular architecture of the endocytic TPLATE complex
Klaas Yperman, Jie Wang, Dominique Eeckhout, Joanna Winkler, Lam Dai Vu, Michael Vandorpe, Peter Grones, Evelien Mylle, Michael Kraus, Romain Merceron, Jonah Nolf, Eliana Mor, Pieter De Bruyn, Remy Loris, Martin Potocký, Savvas N. Savvides, Bert De Rybel, Geert De Jaeger, Daniël Van Damme, Roman Pleskot
bioRxiv 2020.08.13.249276; doi: https://doi.org/10.1101/2020.08.13.249276

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