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Heterologous expression of cryptomaldamide in a cyanobacterial host

View ORCID ProfileArnaud Taton, View ORCID ProfileAndrew Ecker, View ORCID ProfileBrienna Diaz, Nathan A. Moss, View ORCID ProfileBrooke Anderson, View ORCID ProfileRaphael Reher, View ORCID ProfileTiago F. Leão, View ORCID ProfileRyan Simkovsky, View ORCID ProfilePieter C. Dorrestein, View ORCID ProfileLena Gerwick, View ORCID ProfileWilliam H. Gerwick, View ORCID ProfileJames W. Golden
doi: https://doi.org/10.1101/2020.08.26.267179
Arnaud Taton
1Division of Biological Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Andrew Ecker
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
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Brienna Diaz
1Division of Biological Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Nathan A. Moss
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
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Brooke Anderson
1Division of Biological Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Raphael Reher
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
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Tiago F. Leão
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Ryan Simkovsky
1Division of Biological Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Pieter C. Dorrestein
3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California 92093, United States
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Lena Gerwick
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
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William H. Gerwick
2Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, California 92093, United States
3Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, California 92093, United States
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James W. Golden
1Division of Biological Sciences, University of California, San Diego, La Jolla, California 92093, United States
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  • For correspondence: jwgolden@ucsd.edu
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ABSTRACT

Filamentous marine cyanobacteria make a variety of bioactive molecules that are produced by polyketide synthases, non-ribosomal peptide synthetases, and hybrid pathways that are encoded by large biosynthetic gene clusters. These cyanobacterial natural products represent potential drugs leads; however, thorough pharmacological investigations have been impeded by the limited quantity of compound that is typically available from the native organisms. Additionally, investigations of the biosynthetic gene clusters and enzymatic pathways have been difficult due to the inability to conduct genetic manipulations in the native producers. Here we report a set of genetic tools for the heterologous expression of biosynthetic gene clusters in the cyanobacteria Synechococcus elongatus PCC 7942 and Anabaena (Nostoc) PCC 7120. To facilitate the transfer of gene clusters in both strains, we engineered a strain of Anabaena that contains S. elongatus homologous sequences for chromosomal recombination at a neutral site and devised a CRISPR-based strategy to efficiently obtain segregated double recombinant clones of Anabaena. These genetic tools were used to express the large 28.7 kb cryptomaldamide biosynthetic gene cluster from the marine cyanobacterium Moorena (Moorea) producens JHB in both model strains. S. elongatus did not produce cryptomaldamide, however high-titer production of cryptomaldamide was obtained in Anabaena. The methods developed in this study will facilitate the heterologous expression of biosynthetic gene clusters isolated from marine cyanobacteria and complex metagenomic samples.

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Competing Interest Statement

W.H.G. has an equity interest in Sirenas Marine Discovery, Inc., a company that may potentially benefit from the research results, and also serves on the company Scientific Advisory Board. The terms of this arrangement have been reviewed and approved by the University of California, San Diego in accordance with its conflict of interest policies.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.
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Posted August 26, 2020.
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Heterologous expression of cryptomaldamide in a cyanobacterial host
Arnaud Taton, Andrew Ecker, Brienna Diaz, Nathan A. Moss, Brooke Anderson, Raphael Reher, Tiago F. Leão, Ryan Simkovsky, Pieter C. Dorrestein, Lena Gerwick, William H. Gerwick, James W. Golden
bioRxiv 2020.08.26.267179; doi: https://doi.org/10.1101/2020.08.26.267179
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Heterologous expression of cryptomaldamide in a cyanobacterial host
Arnaud Taton, Andrew Ecker, Brienna Diaz, Nathan A. Moss, Brooke Anderson, Raphael Reher, Tiago F. Leão, Ryan Simkovsky, Pieter C. Dorrestein, Lena Gerwick, William H. Gerwick, James W. Golden
bioRxiv 2020.08.26.267179; doi: https://doi.org/10.1101/2020.08.26.267179

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