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Genome-wide transcript and protein analysis reveals distinct features of aging in the mouse heart

View ORCID ProfileIsabela Gerdes Gyuricza, Joel M. Chick, Gregory R. Keele, Andrew G. Deighan, Steven C. Munger, Ron Korstanje, Steven P. Gygi, Gary A. Churchill
doi: https://doi.org/10.1101/2020.08.28.272260
Isabela Gerdes Gyuricza
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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  • ORCID record for Isabela Gerdes Gyuricza
Joel M. Chick
2Vividion Therapeutics, San Diego, California 92121, USA
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Gregory R. Keele
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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Andrew G. Deighan
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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Steven C. Munger
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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Ron Korstanje
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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Steven P. Gygi
3Harvard Medical School, Boston, Massachusetts 02115, USA
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Gary A. Churchill
1The Jackson Laboratory, Bar Harbor, Maine 04609 USA
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  • For correspondence: gary.churchill@jax.org
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ABSTRACT

Understanding the molecular mechanisms underlying age-related changes in the heart is challenging due to the contributions from numerous genetic and environmental factors. Genetically diverse outbred mice provide a model to study the genetic regulation of aging processes in healthy tissues from individuals undergoing natural aging in a controlled environment. We analyzed transcriptome and proteome data from outbred mice at 6, 12 and 18 months of age to reveal a scenario of cardiac hypertrophy, fibrosis, extracellular matrix remodeling, and reemergence of fetal gene expression patterns. We observed widespread changes in protein trafficking and sorting, and post-translational disruption of the stoichiometry of the protein quality control system itself. We identified genome hotspots of age-by-genetic effects that regulate proteins from the proteasome and endoplasmic reticulum stress response, suggesting that genetic variation in these modules may contribute to individual variation in the aging heart.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • https://churchilllab.jax.org/qtlviewer/JAC/DOHeart

  • https://figshare.com/articles/software/Aging_Heart_DO_analysis/12430094

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted August 28, 2020.
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Genome-wide transcript and protein analysis reveals distinct features of aging in the mouse heart
Isabela Gerdes Gyuricza, Joel M. Chick, Gregory R. Keele, Andrew G. Deighan, Steven C. Munger, Ron Korstanje, Steven P. Gygi, Gary A. Churchill
bioRxiv 2020.08.28.272260; doi: https://doi.org/10.1101/2020.08.28.272260
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Genome-wide transcript and protein analysis reveals distinct features of aging in the mouse heart
Isabela Gerdes Gyuricza, Joel M. Chick, Gregory R. Keele, Andrew G. Deighan, Steven C. Munger, Ron Korstanje, Steven P. Gygi, Gary A. Churchill
bioRxiv 2020.08.28.272260; doi: https://doi.org/10.1101/2020.08.28.272260

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