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Distinct genetic bases for plant root responses to lipo-chitooligosaccharide signal molecules from distinct microbial origins

View ORCID ProfileMaxime Bonhomme, View ORCID ProfileSandra Bensmihen, Olivier André, Emilie Amblard, Magali Garcia, Fabienne Maillet, Virginie Puech-Pagès, View ORCID ProfileClare Gough, Sébastien Fort, Sylvain Cottaz, View ORCID ProfileGuillaume Bécard, View ORCID ProfileChristophe Jacquet
doi: https://doi.org/10.1101/2020.09.09.285668
Maxime Bonhomme
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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  • ORCID record for Maxime Bonhomme
Sandra Bensmihen
2LIPM, Université de Toulouse, INRAE, CNRS, 31326 Castanet-Tolosan, France
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  • For correspondence: Sandra.bensmihen@inrae.fr jacquet@lrsv.ups-tlse.fr
Olivier André
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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Emilie Amblard
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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Magali Garcia
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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Fabienne Maillet
2LIPM, Université de Toulouse, INRAE, CNRS, 31326 Castanet-Tolosan, France
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Virginie Puech-Pagès
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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Clare Gough
2LIPM, Université de Toulouse, INRAE, CNRS, 31326 Castanet-Tolosan, France
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  • ORCID record for Clare Gough
Sébastien Fort
3Univ. Grenoble Alpes, CNRS, CERMAV, 38000 Grenoble, France
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Sylvain Cottaz
3Univ. Grenoble Alpes, CNRS, CERMAV, 38000 Grenoble, France
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Guillaume Bécard
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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Christophe Jacquet
1Laboratoire de Recherche en Sciences Végétales, Université de Toulouse, CNRS, UPS, Castanet-Tolosan, France
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  • ORCID record for Christophe Jacquet
  • For correspondence: Sandra.bensmihen@inrae.fr jacquet@lrsv.ups-tlse.fr
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Summary

  • Lipo-chitooligosaccharides (LCOs) were originally found as symbiotic signals called Nod Factors (Nod-LCOs) controlling nodulation of legumes by rhizobia. More recently LCOs were also found in symbiotic fungi and, more surprisingly, very widely in the kingdom fungi including in saprophytic and pathogenic fungi. The LCO-V(C18:1, Fuc/MeFuc), hereafter called Fung-LCOs, are the LCO structures most commonly found in fungi. This raises the question of how legume plants, such as Medicago truncatula, can perceive and discriminate between Nod-LCOs and these Fung-LCOs.

  • To address this question, we performed a Genome Wide Association Study on 173 natural accessions of Medicago truncatula, using a root branching phenotype and a newly developed local score approach.

  • Both Nod- and Fung-LCOs stimulated root branching in most accessions but there was very little correlation in the ability to respond to these types of LCO molecules. Moreover, heritability of root response was higher for Nod-LCOs than for Fung-LCOs. We identified 123 loci for Nod-LCO and 71 for Fung-LCO responses, but only one was common.

  • This suggests that Nod- and Fung-LCOs both control root branching but use different molecular mechanisms. The tighter genetic constraint of the root response to Fung-LCOs possibly reflects the ancestral origin of the biological activity of these molecules.

Competing Interest Statement

The authors have declared no competing interest.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Distinct genetic bases for plant root responses to lipo-chitooligosaccharide signal molecules from distinct microbial origins
Maxime Bonhomme, Sandra Bensmihen, Olivier André, Emilie Amblard, Magali Garcia, Fabienne Maillet, Virginie Puech-Pagès, Clare Gough, Sébastien Fort, Sylvain Cottaz, Guillaume Bécard, Christophe Jacquet
bioRxiv 2020.09.09.285668; doi: https://doi.org/10.1101/2020.09.09.285668
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Distinct genetic bases for plant root responses to lipo-chitooligosaccharide signal molecules from distinct microbial origins
Maxime Bonhomme, Sandra Bensmihen, Olivier André, Emilie Amblard, Magali Garcia, Fabienne Maillet, Virginie Puech-Pagès, Clare Gough, Sébastien Fort, Sylvain Cottaz, Guillaume Bécard, Christophe Jacquet
bioRxiv 2020.09.09.285668; doi: https://doi.org/10.1101/2020.09.09.285668

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