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Estimating effects of parents’ cognitive and non-cognitive skills on offspring education using polygenic scores

View ORCID ProfilePerline A. Demange, View ORCID ProfileJouke Jan Hottenga, View ORCID ProfileAbdel Abdellaoui, View ORCID ProfileEspen Moen Eilertsen, View ORCID ProfileMargherita Malanchini, Benjamin W. Domingue, View ORCID ProfileEveline L. de Zeeuw, View ORCID ProfileKaili Rimfeld, View ORCID ProfileThalia C. Eley, View ORCID ProfileDorret I. Boomsma, View ORCID ProfileElsje van Bergen, View ORCID ProfileGerome Breen, View ORCID ProfileMichel G. Nivard, View ORCID ProfileRosa Cheesman
doi: https://doi.org/10.1101/2020.09.15.296236
Perline A. Demange
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
2Amsterdam Public Health Research Institute, Amsterdam University Medical Centers, Amsterdam, The Netherlands
3Research Institute LEARN!, Vrije Universiteit Amsterdam, The Netherlands
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  • For correspondence: [email protected] [email protected]
Jouke Jan Hottenga
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
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Abdel Abdellaoui
4Department of Psychiatry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands
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Espen Moen Eilertsen
10PROMENTA Research Center, Department of Psychology, University of Oslo, Norway
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  • ORCID record for Espen Moen Eilertsen
Margherita Malanchini
5Department of Biological and Experimental Psychology, School of Biological and Chemical Sciences, Queen Mary University of London, UK
6Social, Genetic & Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, UK
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Benjamin W. Domingue
7Graduate School of Education, Stanford University, USA
8Center for Population Health Sciences, Stanford University, USA
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Eveline L. de Zeeuw
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
3Research Institute LEARN!, Vrije Universiteit Amsterdam, The Netherlands
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Kaili Rimfeld
6Social, Genetic & Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, UK
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Thalia C. Eley
6Social, Genetic & Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, UK
9NIHR Maudsley Biomedical Research Centre; South London and Maudsley NHS Trust, UK
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Dorret I. Boomsma
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
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Elsje van Bergen
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
3Research Institute LEARN!, Vrije Universiteit Amsterdam, The Netherlands
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Gerome Breen
6Social, Genetic & Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, UK
9NIHR Maudsley Biomedical Research Centre; South London and Maudsley NHS Trust, UK
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Michel G. Nivard
1Department of Biological Psychology, Vrije Universiteit Amsterdam, The Netherlands
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Rosa Cheesman
10PROMENTA Research Center, Department of Psychology, University of Oslo, Norway
6Social, Genetic & Developmental Psychiatry Centre, Institute of Psychiatry, Psychology & Neuroscience, King’s College London, UK
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  • For correspondence: [email protected] [email protected]
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Abstract

Understanding how parents’ cognitive and non-cognitive skills influence offspring education is vital for educational, family and economic policy. We use genetics (GWAS-by-subtraction) to assess a latent, broad non-cognitive skills dimension. To index parental effects controlling for genetic transmission, we estimate indirect parental genetic effects of polygenic scores on childhood and adulthood educational outcomes, using siblings (N=47,459), adoptees (N=6,407), and parent-offspring trios (N=2,534) in three UK and Dutch cohorts. We find that parental cognitive and non-cognitive skills affect offspring education through their environment: on average across cohorts and designs, indirect genetic effects explain 36-40% of population polygenic score associations. However, indirect genetic effects are lower for achievement in the Dutch cohort, and for the adoption design. We identify causes of higher sibling- and trio-based estimates: prenatal indirect genetic effects, population stratification, and assortative mating. Our phenotype-agnostic, genetically sensitive approach has established overall environmental effects of parents’ skills, facilitating future mechanistic work.

Competing Interest Statement

The authors have declared no competing interest.

Footnotes

  • We added simulations to assess effects of biases on the three designs. We ran the sibling design analyses using the population effect instead of the between-sibling effect as "total" effect. We updated Figure 1 and 2 and changed Figure 3 to illustrate the simulations. We revised the manuscript to improve its clarity.

  • https://github.com/PerlineDemange/GeneticNurtureNonCog

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license.
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Posted June 26, 2021.
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Estimating effects of parents’ cognitive and non-cognitive skills on offspring education using polygenic scores
Perline A. Demange, Jouke Jan Hottenga, Abdel Abdellaoui, Espen Moen Eilertsen, Margherita Malanchini, Benjamin W. Domingue, Eveline L. de Zeeuw, Kaili Rimfeld, Thalia C. Eley, Dorret I. Boomsma, Elsje van Bergen, Gerome Breen, Michel G. Nivard, Rosa Cheesman
bioRxiv 2020.09.15.296236; doi: https://doi.org/10.1101/2020.09.15.296236
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Estimating effects of parents’ cognitive and non-cognitive skills on offspring education using polygenic scores
Perline A. Demange, Jouke Jan Hottenga, Abdel Abdellaoui, Espen Moen Eilertsen, Margherita Malanchini, Benjamin W. Domingue, Eveline L. de Zeeuw, Kaili Rimfeld, Thalia C. Eley, Dorret I. Boomsma, Elsje van Bergen, Gerome Breen, Michel G. Nivard, Rosa Cheesman
bioRxiv 2020.09.15.296236; doi: https://doi.org/10.1101/2020.09.15.296236

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